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SR-VP_0-2_scaffold_141_3111736

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_3111736_1
Acinetobacter junii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(117..1067)
DNA (951bp) protein (317aa)
Uncharacterized protein n=2 Tax=Acinetobacter junii RepID=N8ZU99_ACIJU
Uncharacterized protein {ECO:0000313|EMBL:EPR86687.1}; TaxID=1330047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter junii MTCC 11364.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3111736_2
unknown

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1316..1531
DNA (216bp) protein (72aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_3111736_3

Not on your lists

1565..1852
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AJI8_METOI
Uncharacterized protein {ECO:0000313|EMBL:KHO50927.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3111736_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

2107..4719
DNA (2613bp) protein (871aa)
DNA mismatch repair protein MutS n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0I4_METHD
DNA mismatch repair protein MutS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5135..6073
DNA (939bp) protein (313aa)
Alcohol dehydrogenase, zinc-containing n=1 Tax=Bacillus sp. B14905 RepID=A3IFS3_9BACI id=71486 bin=ACD50 species=Bacillus sp. B14905 genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
Zn-dependent oxidoreductase, NADPH:quinone reductase {ECO:0000313|EMBL:KCZ73051.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative NAD-dependent alcohol dehydrogenase
SR-VP_0-2_scaffold_141_3111736_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6097..6387
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HIG0_METFS
Protein of unknown function (DUF2769)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6408..7145
DNA (738bp) protein (246aa)
Putative uncharacterized protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I9X0_METB6
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_3111736_8
CG_Pacearch_02, Pacearchaeota, Archaea

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7847..8104
DNA (258bp) protein (86aa)
hypothetical protein
id=5103172 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=CG_Pacearch_02
SR-VP_0-2_scaffold_141_3111736_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8142..8972
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003722246
Site-specific recombinase XerD {ECO:0000313|EMBL:KCZ72093.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
integrase family protein
SR-VP_0-2_scaffold_141_3111736_10
unknown

Not on your lists

comp(9287..9589)
DNA (303bp) protein (101aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_3111736_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9857..10630
DNA (774bp) protein (258aa)
GTPase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TKK1_METAC
GTPase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_3111736_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10611..10808)
DNA (198bp) protein (66aa)
UPI0003D1B458 related cluster n=1 Tax=unknown RepID=UPI0003D1B458
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_3111736_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(10859..11401)
DNA (543bp) protein (181aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase (EC:3.6.1.23)
Probable deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Methanosarcina mazei RepID=DUT_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(11643..12992)
DNA (1350bp) protein (450aa)
tRNA-guanine(15) transglycosylase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUZ2_METHD
tRNA-guanine transglycosylase, archaeosine-15-forming
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_trna_1
unknown

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13580..13665
DNA (86bp)
transferRNA Ser
SR-VP_0-2_scaffold_141_3111736_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(13968..14930)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YW08_METPS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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15057..15563
DNA (507bp) protein (169aa)
Thioredoxin n=1 Tax=Melioribacter roseus (strain P3M) RepID=I7A1U1_MELRP
thioredoxin
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(15556..16719)
DNA (1164bp) protein (388aa)
Probable tRNA sulfurtransferase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPU5_METZD
thiamine biosynthesis/tRNA modification protein ThiI
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(16859..17323)
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Desulfovibrio oxyclinae RepID=UPI000367A6A8
molybdopterin-guanine dinucleotide biosynthesis protein B
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17311..18063)
DNA (753bp) protein (251aa)
Formate dehydrogenase family accessory protein FdhD n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP59_METZD
formate dehydrogenase family accessory protein FdhD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18110..18721)
DNA (612bp) protein (204aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; GTP:molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Mo-MPT guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Molybdopterin-guanine dinucleotide synthase {ECO:0000256|HAMAP-Rule:MF_00316}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6Y1_METEZ
molybdopterin-guanine dinucleotide biosynthesis protein
SR-VP_0-2_scaffold_141_3111736_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(18737..19423)
DNA (687bp) protein (229aa)
UPF0758 protein Mbar_A2303 n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Y2303_METBF
DNA repair protein RadC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

19536..19694
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D83_METBF
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(19740..20099)
DNA (360bp) protein (120aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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20191..20649
DNA (459bp) protein (153aa)
Transcriptional regulator n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WM3_METBU
AsnC family transcriptional regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_25
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

20646..21281
DNA (636bp) protein (212aa)
Siroheme synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6D3_METEZ
siroheme synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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21308..22564
DNA (1257bp) protein (419aa)
Glutamyl-tRNA reductase n=2 Tax=root RepID=D7E6D2_METEZ
glutamyl-tRNA reductase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_27
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22570..23232)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q467Z0_METBF
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein {ECO:0000313|EMBL:KCZ70666.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3111736_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(23245..23634)
DNA (390bp) protein (130aa)
UPF0212 protein Mzhil_0762 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKM3_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3111736_29
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(23649..23936)
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XB6_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 46 in total

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