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SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_1
unknown

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comp(3..98)
-----------------
DNA (96bp)
protein (32aa)

This feature has no annotations

SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(333..1460)
-----------------
DNA (1128bp)
protein (376aa)
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:KCZ71994.1}; EC=1.1.1.85 {ECO:0000313|EMBL:KCZ71994.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-isopropylmalate dehydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU72_METAC
leuB; 3-isopropylmalate dehydrogenase
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_3
unknown

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comp(1555..2826)
-----------------
DNA (1272bp)
protein (424aa)
UPI0003D1A495 related cluster n=1 Tax=unknown RepID=UPI0003D1A495
TraB family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_4
unknown

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comp(2828..3931)
-----------------
DNA (1104bp)
protein (368aa)
Zinc metalloprotease (EC:3.4.24.-)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46DU2_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_5
unknown

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4115..6031
-----------------
DNA (1917bp)
protein (639aa)
lon; lon-related putative ATP-dependent protease (EC:3.4.21.-)
Lon-related putative ATP-dependent protease n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I956_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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6039..7364
-----------------
DNA (1326bp)
protein (442aa)
Putative Zn-dependent protease-like protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0I2_METHD
Putative Zn-dependent protease-like protein {ECO:0000313|EMBL:KCZ71048.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative Zn-dependent protease-like protein
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_7
unknown

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comp(7660..8058)
-----------------
DNA (399bp)
protein (133aa)
Methionyl-tRNA synthetase suspected. See adjacent gene [SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_8].
Tax=RBG_16_Euryarchaeota_41_19_curated
methionyl-tRNA synthetase (EC:6.1.1.10)
Methionine--tRNA ligase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBU4_METEZ
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_8
unknown

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comp(8099..9451)
-----------------
DNA (1353bp)
protein (451aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
UPI0003D1BF9C related cluster n=1 Tax=unknown RepID=UPI0003D1BF9C
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9621..9821
-----------------
DNA (201bp)
protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72072.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_10
unknown

Not on your lists

comp(9836..10009)
-----------------
DNA (174bp)
protein (58aa)

This feature has no annotations

SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10130..10567
-----------------
DNA (438bp)
protein (146aa)
UPF0216 protein BSM_17710 n=1 Tax=uncultured archaeon RepID=D1JID6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ72461.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10682..12454
-----------------
DNA (1773bp)
protein (591aa)
UPF0313 protein MCON_1402 n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BSW2_METCG
UPF0313 protein ANME2D_00989 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Radical SAM N-terminal domain-containing protein
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12541..12879
-----------------
DNA (339bp)
protein (113aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70990.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein id=1817173 bin=GWA2_Planctomycete_KSU_39_15 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycete_KSU_39_15 organism_group=Planctomycetes
hypothetical protein
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_14
unknown

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13115..14473
-----------------
DNA (1359bp)
protein (453aa)
Probable 2-isopropylmalate synthase 2 n=1 Tax=uncultured archaeon RepID=Q2Y4F2_9ARCH
isopropylmalate/citramalate/homocitrate synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_15
unknown

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comp(14450..15460)
-----------------
DNA (1011bp)
protein (337aa)
Phosphoesterase DHHA1 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MIA7_9EURY
phosphoesterase DHHA1
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_16
unknown

Not on your lists

comp(15463..15822)
-----------------
DNA (360bp)
protein (120aa)
Prefoldin subunit beta n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAN4_METMS
prefoldin subunit beta
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_5186_17
unknown

Not on your lists

comp(15858..16115)
-----------------
DNA (258bp)
protein (86aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8G0_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 17 items

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