ggKbase home page

SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_1
unknown

Not on your lists

1..135
DNA (135bp) protein (45aa)

This feature has no annotations

SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_2
unknown

Not on your lists

132..362
DNA (231bp) protein (77aa)

This feature has no annotations

SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

386..889
DNA (504bp) protein (168aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72524.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_4
unknown

Not on your lists

898..2427
DNA (1530bp) protein (510aa)

This feature has no annotations

SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

2431..3246
DNA (816bp) protein (272aa)
Exosortase 1 id=2882462 bin=GWF2_OP3_43_52 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3276..4004
DNA (729bp) protein (243aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72442.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4030..4263
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72443.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4247..4999)
DNA (753bp) protein (251aa)
CAAX amino terminal protease family n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYQ0_METHD
CAAX amino terminal protease family {ECO:0000313|EMBL:KCZ71723.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CAAX amino terminal protease family
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4996..5904)
DNA (909bp) protein (303aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8Z9_METMS
Putative membrane protein {ECO:0000313|EMBL:KCZ71724.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_trna_1
unknown

Not on your lists

comp(5964..6037)
DNA (74bp)
transferRNA Arg
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

6096..6437
DNA (342bp) protein (114aa)
UPI0003D1C59B related cluster n=1 Tax=unknown RepID=UPI0003D1C59B
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6521..6877
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI38_METAC
Uncharacterized protein {ECO:0000313|EMBL:KCZ72780.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6902..7912
DNA (1011bp) protein (337aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000313|EMBL:KCZ70844.1}; EC=2.4.99.17 {ECO:0000313|EMBL:KCZ70844.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Clostridium sp. CAG:221 RepID=R6G5J6_9CLOT
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

7920..9035
DNA (1116bp) protein (372aa)
tgt; queuine tRNA-ribosyltransferase Tgt (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=3 Tax=Thermoanaerobacter RepID=TGT_THEP3
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

9174..9962
DNA (789bp) protein (263aa)
Thermosome subunit n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KZ13_METHD
thermosome subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

9937..10833
DNA (897bp) protein (299aa)
Thermosome subunit n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46D74_METBF
Heat shock protein 60 family chaperone GroEL
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10872..11258
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70731.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

11268..12047
DNA (780bp) protein (260aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12059..13129)
DNA (1071bp) protein (357aa)
Radical SAM domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP01_METZD
TIGR01210 family protein {ECO:0000313|EMBL:KCZ70904.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
radical SAM protein
SRVP18_hole-7m-from-trench_1_20cm_scaffold_2435_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(13086..13997)
DNA (912bp) protein (304aa)
UPI0003D1AAD6 related cluster n=1 Tax=unknown RepID=UPI0003D1AAD6
GMP synthase, glutamine-hydrolyzing, C-terminal domain or B subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 20 items

View Taxonomy