ggKbase home page

SR-VP_26_10_2019_1_90cm_scaffold_18067

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_1_90cm_scaffold_18067_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

200..718
DNA (519bp) protein (173aa)
UPI0003D1B6AC related cluster n=1 Tax=unknown RepID=UPI0003D1B6AC
Putative transcriptional regulator with an HTH domain {ECO:0000313|EMBL:KCZ73072.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative transcriptional regulator with an HTH domain
SR-VP_26_10_2019_1_90cm_scaffold_18067_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

811..2121
DNA (1311bp) protein (437aa)
Glutamate-1-semialdehyde 2,1-aminomutase {ECO:0000256|HAMAP-Rule:MF_00375}; Short=GSA {ECO:0000256|HAMAP-Rule:MF_00375};; EC=5.4.3.8 {ECO:0000256|HAMAP-Rule:MF_00375};; Glutamate-1-semialdehyde aminotransferase {ECO:0000256|HAMAP-Rule:MF_00375}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
UPI0003D1BB3D related cluster n=1 Tax=unknown RepID=UPI0003D1BB3D
SR-VP_26_10_2019_1_90cm_scaffold_18067_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2118..3074
DNA (957bp) protein (319aa)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hydroxymethylbilane synthase (EC:2.5.1.61)
Probable porphobilinogen deaminase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E721_METMS
SR-VP_26_10_2019_1_90cm_scaffold_18067_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3067..3828
DNA (762bp) protein (254aa)
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:KCZ72557.1}; EC=2.1.1.107 {ECO:0000313|EMBL:KCZ72557.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uroporphyrin-III C-methyltransferase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX65_METHD
uroporphyrin-III C-methyltransferase
SR-VP_26_10_2019_1_90cm_scaffold_18067_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3857..4594
DNA (738bp) protein (246aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KCZ72558.1}; EC=4.2.1.75 {ECO:0000313|EMBL:KCZ72558.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1A666 related cluster n=1 Tax=unknown RepID=UPI0003D1A666
hemD; uroporphyrinogen-III synthase
Displaying 5 items

View Taxonomy