ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_14688

Search features with annotation key words

Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_14688_1
RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(272..655)
DNA (384bp) protein (128aa)
hypothetical protein; K09005 hypothetical protein id=5043697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
SR-VP_26_10_2019_2_100cm_scaffold_14688_2
unknown

Not on your lists

comp(1258..1899)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZV6_METMA
Uncharacterized protein {ECO:0000313|EMBL:KKL08308.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
membrane protein, putative
SR-VP_26_10_2019_2_100cm_scaffold_14688_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2041..2685
DNA (645bp) protein (215aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
2-phospho-L-lactate guanylyltransferase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RII0_METP4
2-phospho-L-lactate guanylyltransferase CofC
SR-VP_26_10_2019_2_100cm_scaffold_14688_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2743..3639
DNA (897bp) protein (299aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB26_METMS
pyridoxal phosphate synthase yaaD subunit
SR-VP_26_10_2019_2_100cm_scaffold_14688_5

Not on your lists

comp(3644..4957)
DNA (1314bp) protein (438aa)
Amino acid transporter n=1 Tax=Candidatus Nitrosoarchaeum limnia SFB1 RepID=F3KKE3_9ARCH
Putative amino acid-proton symporter YbeC protein {ECO:0000313|EMBL:KER06495.1}; TaxID=1502292 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Marine Group I.;" source="Marine Group I thaumarchaeote SCGC AAA799-E16.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_14688_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5091..5405
DNA (315bp) protein (105aa)
UPI0003D1C134 related cluster n=1 Tax=unknown RepID=UPI0003D1C134
Cbb3-type cytochrome oxidase, subunit 1
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 6 items

View Taxonomy