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SR-VP_26_10_2019_2_100cm_scaffold_5826

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_5826_1
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(35..535)
DNA (501bp) protein (167aa)
Amidohydrolase n=1 Tax=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) RepID=A7IN34_XANP2
Enamidase {ECO:0000313|EMBL:KGM34887.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
amidohydrolase
SR-VP_26_10_2019_2_100cm_scaffold_5826_2

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654..1211
DNA (558bp) protein (186aa)
Isochorismatase hydrolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01XY4_SOLUE
isochorismatase hydrolase
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
SR-VP_26_10_2019_2_100cm_scaffold_5826_3
Hyphomicrobium sp. MC1, Hyphomicrobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1219..2253
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Hyphomicrobium sp. (strain MC1) RepID=F8JAC0_HYPSM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCB66639.1}; TaxID=717785 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium sp. (strain MC1).;"
SR-VP_26_10_2019_2_100cm_scaffold_5826_4
unknown

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2682..3788
DNA (1107bp) protein (369aa)
ORC1-type DNA replication protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTG5_METCG
cdc6; cell division control protein 6
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_5826_5
unknown

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3874..4107
DNA (234bp) protein (78aa)
Archaeal histone n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7P3_METMS
archaeal histone
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_5826_6

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4183..4617
DNA (435bp) protein (145aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1J9H6_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH38756.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
ribonuclease III
SR-VP_26_10_2019_2_100cm_scaffold_5826_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4651..5199
DNA (549bp) protein (183aa)
Phosphatidate cytidylyltransferase family protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z278_METPS
Dolichol kinase {ECO:0000313|EMBL:KCZ73106.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphatidate cytidylyltransferase family protein
SR-VP_26_10_2019_2_100cm_scaffold_5826_8
unknown

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comp(5322..5633)
DNA (312bp) protein (104aa)
50S ribosomal protein L12 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PY50_METMA
rpl12p; 50S ribosomal protein L12
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_5826_9
unknown

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comp(5653..6678)
DNA (1026bp) protein (342aa)
50S ribosomal protein L10 n=2 Tax=Methanococcoides burtonii RepID=RL10_METBU
rplP0; acidic ribosomal protein P0
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_5826_10
unknown

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comp(6679..7425)
DNA (747bp) protein (249aa)
50S ribosomal protein L1 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RL1_METBU
rpl1P; 50S ribosomal protein L1P
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_5826_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7437..8150)
DNA (714bp) protein (238aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3V2_GEODF
Uncharacterized protein {ECO:0000313|EMBL:KCZ70363.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4Fe-4S ferredoxin
SR-VP_26_10_2019_2_100cm_scaffold_5826_12
unknown

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8275..8853
DNA (579bp) protein (193aa)
AsnC/Lrp family transcriptional regulator n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YW62_METPS
AsnC/Lrp family transcriptional regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_5826_13
unknown

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comp(8875..9300)
DNA (426bp) protein (142aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_5826_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9310..9882)
DNA (573bp) protein (191aa)
Rubrerythrin id=4959320 bin=GWC2_Syntrophobacterales_56_13 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
rubrerythrin
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_5826_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10155..10616)
DNA (462bp) protein (154aa)
Riboflavin synthase {ECO:0000256|PIRNR:PIRNR015750}; EC=2.5.1.9 {ECO:0000256|PIRNR:PIRNR015750};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ribC; riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TPT8_METAC
Displaying 15 items

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