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SR-VP_26_10_2019_2_100cm_scaffold_1054

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1054_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..653
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TH78_METAC
Arabinose efflux permease family protein {ECO:0000313|EMBL:KCZ71487.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1054_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(607..1182)
DNA (576bp) protein (192aa)
GMP synthase [glutamine-hydrolyzing] subunit A {ECO:0000256|HAMAP-Rule:MF_01510}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_01510};; Glutamine amidotransferase {ECO:0000256|HAMAP-Rule:MF_01510}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
GMP synthase [glutamine-hydrolyzing] subunit A n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KSY9_METHD
GMP synthase, glutamine-hydrolyzing, N-terminal domain or A subunit
SR-VP_26_10_2019_2_100cm_scaffold_1054_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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1300..2553
DNA (1254bp) protein (418aa)
hypothetical protein id=17472726 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
Tax=RBG_16_Euryarchaeota_68_12_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2564..2749)
DNA (186bp) protein (62aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71485.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1054_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2753..4330)
DNA (1578bp) protein (526aa)
D-3-phosphoglycerate dehydrogenase {ECO:0000313|EMBL:KCZ72990.1}; EC=1.1.1.95 {ECO:0000313|EMBL:KCZ72990.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
D-3-phosphoglycerate dehydrogenase (EC:1.1.1.95)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XLP8_METZD
SR-VP_26_10_2019_2_100cm_scaffold_1054_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4416..5117
DNA (702bp) protein (234aa)
2, 5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine 1'-reductase {ECO:0000313|EMBL:KCZ72384.1}; EC=1.1.1.302 {ECO:0000313|EMBL:KCZ72384.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5-amino-6-(5-phosphoribosylamino)uracil reductase (EC:1.1.1.193)
UPI0003D1C5D7 related cluster n=1 Tax=unknown RepID=UPI0003D1C5D7
SR-VP_26_10_2019_2_100cm_scaffold_1054_7
unknown

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5144..5503
DNA (360bp) protein (120aa)
Transcriptional repressor, CopY family n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MI73_9EURY
transcriptional repressor, CopY family
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5500..6177
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFS4_9EURY
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1054_9
unknown

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6216..7175
DNA (960bp) protein (320aa)
Protease HtpX homolog id=4716627 bin=GWA2_OP3_53_43 species=Methanobrevibacter ruminantium genus=Methanobrevibacter taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
htpX; heat shock protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_10
unknown

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7491..8393
DNA (903bp) protein (301aa)
Putative phosphoserine phosphatase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7W9_METTP
putative phosphoserine phosphatase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_11
unknown

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8444..8719
DNA (276bp) protein (92aa)
Acylphosphatase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3A4_THEGP
acylphosphatase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_12
unknown

Not on your lists

comp(9131..9532)
DNA (402bp) protein (134aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_13
unknown

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comp(9501..10424)
DNA (924bp) protein (308aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10774..12591
DNA (1818bp) protein (606aa)
Metal-dependent phosphohydrolase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEP9_9EURY
HD superfamily phosphohydrolase {ECO:0000313|EMBL:KCZ72365.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
metal-dependent phosphohydrolase
SR-VP_26_10_2019_2_100cm_scaffold_1054_15
unknown

Not on your lists

12664..12771
DNA (108bp) protein (36aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1054_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12784..13026)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72363.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1054_17
unknown

Not on your lists

13132..13497
DNA (366bp) protein (122aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_18
unknown

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comp(13520..15025)
DNA (1506bp) protein (502aa)
lysK; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B789_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_19
unknown

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15151..15603
DNA (453bp) protein (151aa)
Phosphopantetheine adenylyltransferase, type II eukaryotic (EC:2.7.7.3)
Phosphopantetheine adenylyltransferase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=COAD_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_20
unknown

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15700..16299
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000371C2EC
Uncharacterized protein {ECO:0000313|EMBL:KKN40079.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1054_21

Not on your lists

16293..16703
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00036E90B5
hypothetical protein
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_52_10_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16750..17484)
DNA (735bp) protein (245aa)
Glutamate synthase alpha subunit domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9Q7_METEZ
Glutamate synthase family protein {ECO:0000313|EMBL:KCZ71399.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamate synthase subunit alpha domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_1054_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17484..18983)
DNA (1500bp) protein (500aa)
Archaeal glutamate synthase [NADPH] {ECO:0000256|PIRNR:PIRNR006429}; EC=1.4.1.13 {ECO:0000256|PIRNR:PIRNR006429};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamate synthase (EC:1.4.1.13)
Archaeal glutamate synthase [NADPH] n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9Q8_METEZ
SR-VP_26_10_2019_2_100cm_scaffold_1054_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18983..20059)
DNA (1077bp) protein (359aa)
Glutamine amidotransferase class-II n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9Q9_METEZ
Glutamate synthase family protein {ECO:0000313|EMBL:KCZ71401.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamine amidotransferase
SR-VP_26_10_2019_2_100cm_scaffold_1054_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20049..21335)
DNA (1287bp) protein (429aa)
Putative heterodisulfide reductase, B/C subunits n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=Q3AE66_CARHZ
Heterodisulfide reductase, subunit B {ECO:0000313|EMBL:KCZ71402.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
heterodisulfide reductase, B/C subunits
SR-VP_26_10_2019_2_100cm_scaffold_1054_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21592..23493
DNA (1902bp) protein (634aa)
Molybdopterin molybdochelatase {ECO:0000313|EMBL:KCZ70682.1}; EC=2.10.1.1 {ECO:0000313|EMBL:KCZ70682.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Molybdopterin molybdochelatase n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46EY7_METBF
Molybdopterin biosynthesis protein MoeA
SR-VP_26_10_2019_2_100cm_scaffold_1054_27
unknown

Not on your lists

23533..24537
DNA (1005bp) protein (335aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_28
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(24577..24981)
DNA (405bp) protein (135aa)
Putative 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWL8_METHD
Nucleoside 2-deoxyribosyltransferase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1054_29
unknown

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comp(25008..26204)
DNA (1197bp) protein (399aa)
Uncharacterized membrane-associated protein/domain-like protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I502_METB6
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1054_30
Methanoculleus bourgensis, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(26618..28414)
DNA (1797bp) protein (599aa)
Uncharacterized protein n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7L120_METBM
Ig domain-containing protein {ECO:0000313|EMBL:CCJ37205.1}; TaxID=1201294 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanoculleus.;" source="Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 /; MS2) (Methanogenium bourgense).;"
hypothetical protein
Displaying items 1-30 of 34 in total

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