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SR-VP_26_10_2019_2_100cm_scaffold_1801

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1801_1
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1..516
DNA (516bp) protein (172aa)
Methylenetetrahydrofolate reductase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MF94_9EURY
methylenetetrahydrofolate reductase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1801_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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513..1760
DNA (1248bp) protein (416aa)
UPI0003D1C35E related cluster n=1 Tax=unknown RepID=UPI0003D1C35E
Thiamine biosynthesis protein ThiC {ECO:0000313|EMBL:KCZ71974.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
thiC5; Thiamine biosynthesis protein thiC
SR-VP_26_10_2019_2_100cm_scaffold_1801_3
unknown

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1742..2494
DNA (753bp) protein (251aa)
F420-0:gamma-glutamyl ligase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L2M0_METHD
F420-0:gamma-glutamyl ligase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1801_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2575..3693
DNA (1119bp) protein (373aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1801_5
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(3696..4289)
DNA (594bp) protein (198aa)
Glutamine amidotransferase subunit PdxT n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB27_METMS
pyridoxal phosphate synthase yaaE subunit
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1801_6
unknown

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4565..5536
DNA (972bp) protein (324aa)
Cell division protein FtsZ n=2 Tax=Candidatus Nitrososphaera gargensis RepID=K0IKP2_NITGG
ftsZ2; cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1801_7
unknown

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comp(5531..6208)
DNA (678bp) protein (226aa)
Uroporphyrinogen III synthase HEM4 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMW6_METZD
uroporphyrinogen III synthase HEM4
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1801_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6211..7368)
DNA (1158bp) protein (386aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWQ1_METMA
Uncharacterized protein {ECO:0000313|EMBL:KCZ71991.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1801_9
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7830..8543)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJ27_DESAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB07985.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
SR-VP_26_10_2019_2_100cm_scaffold_1801_10
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8564..9328)
DNA (765bp) protein (255aa)
CRISPR-associated protein Cas5 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJ28_DESAR
CRISPR-associated protein Cas5
CRISPR-associated protein Cas5 {ECO:0000313|EMBL:AEB07986.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
SR-VP_26_10_2019_2_100cm_scaffold_1801_11
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9341..10225)
DNA (885bp) protein (295aa)
CRISPR-associated autoregulator, DevR family n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJ29_DESAR
DevR family CRISPR-associated autoregulator
CRISPR-associated autoregulator, DevR family {ECO:0000313|EMBL:AEB07987.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
SR-VP_26_10_2019_2_100cm_scaffold_1801_12
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10227..11630)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJ30_DESAR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB07988.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
SR-VP_26_10_2019_2_100cm_scaffold_1801_13
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11627..12394)
DNA (768bp) protein (256aa)
CRISPR-associated HD domain protein n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJ31_DESAR
CRISPR-associated HD domain-containing protein
CRISPR-associated HD domain protein {ECO:0000313|EMBL:AEB07989.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
SR-VP_26_10_2019_2_100cm_scaffold_1801_14
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12379..14202)
DNA (1824bp) protein (608aa)
CRISPR-associated helicase Cas3 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJ32_DESAR
CRISPR-associated helicase Cas3
CRISPR-associated helicase Cas3 {ECO:0000313|EMBL:AEB07990.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" source="Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2).;"
SR-VP_26_10_2019_2_100cm_scaffold_1801_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14973..15533)
DNA (561bp) protein (187aa)
UbiD family decarboxylase {ECO:0000313|EMBL:KCZ71988.1}; EC=4.1.1.61 {ECO:0000313|EMBL:KCZ71988.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UbiD family decarboxylase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7Q4_METTP
UbiD family decarboxylase
SR-VP_26_10_2019_2_100cm_scaffold_1801_16
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

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15608..17287
DNA (1680bp) protein (560aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00036C7DB9
hypothetical protein
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
SR-VP_26_10_2019_2_100cm_scaffold_1801_17
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(17380..19047)
DNA (1668bp) protein (556aa)
Electron-transferring-flavoprotein dehydrogenase (EC:1.5.5.1)
Electron-transferring-flavoprotein dehydrogenase id=2922460 bin=GWF2_Planctomycete_41_51 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
SR-VP_26_10_2019_2_100cm_scaffold_1801_18
GWF2_Planctomycetes_42_9_curated, Phycisphaerae, Planctomycetes, Bacteria

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comp(19149..21248)
DNA (2100bp) protein (700aa)
Electron transfer flavoprotein alpha/beta-subunit id=3810469 bin=GWF2_Planctomycetes_42_9 species=Desulfurivibrio alkaliphilus genus=Desulfurivibrio taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Planctomycetes_42_9 organism_group=Planctomycetes
Electron transfer flavoprotein alpha/beta-subunit
Tax=GWF2_Planctomycetes_42_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_1801_19

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21628..22200
DNA (573bp) protein (191aa)
DNA repair protein RecO n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F1J2_ACIC5
recO; DNA repair protein RecO
Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
SR-VP_26_10_2019_2_100cm_scaffold_1801_20

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22197..23147
DNA (951bp) protein (317aa)
Glycyl-tRNA synthetase, alpha chain n=1 Tax=mine drainage metagenome RepID=E6QJY3_9ZZZZ
glyQ; glycyl-tRNA synthetase subunit alpha
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
SR-VP_26_10_2019_2_100cm_scaffold_1801_21

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23144..24076
DNA (933bp) protein (311aa)
Glycyl-tRNA synthetase beta chain n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ISF2_KORVE
glycine--tRNA ligase subunit beta
Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
Displaying 21 items

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