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SR-VP_26_10_2019_2_100cm_scaffold_3526

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_3526_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(118..1395)
DNA (1278bp) protein (426aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EAA3_METMS
SR-VP_26_10_2019_2_100cm_scaffold_3526_2
unknown

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comp(1499..2395)
DNA (897bp) protein (299aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3526_3
Methanosarcina sp. MTP4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2512..3219
DNA (708bp) protein (236aa)
Large repetitive protein {ECO:0000313|EMBL:AKB25234.1}; TaxID=1434100 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. MTP4.;"
SR-VP_26_10_2019_2_100cm_scaffold_3526_trna_1
unknown

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3394..3466
DNA (73bp)
transferRNA Asp
SR-VP_26_10_2019_2_100cm_scaffold_3526_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3672..4661
DNA (990bp) protein (330aa)
GTP-binding protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46AK0_METBF
Putative GTPase {ECO:0000313|EMBL:KCZ71517.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
GTP-binding protein, gtp1/obg family
SR-VP_26_10_2019_2_100cm_scaffold_3526_5
unknown

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comp(4630..5895)
DNA (1266bp) protein (422aa)
Phosphomethylpyrimidine synthase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKN0_METZD
thiamine biosynthesis protein ThiC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3526_6
unknown

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comp(5892..7523)
DNA (1632bp) protein (544aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKM5_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3526_7
unknown

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7738..9051
DNA (1314bp) protein (438aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3526_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9351..10547)
DNA (1197bp) protein (399aa)
Conserved protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PUU4_METMA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3526_9
unknown

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10675..11385
DNA (711bp) protein (237aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3526_10
unknown

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11559..11720
DNA (162bp) protein (54aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3526_11
unknown

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comp(11753..12391)
DNA (639bp) protein (213aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3526_12
Methanobrevibacter ruminantium, Methanobrevibacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(12388..15144)
DNA (2757bp) protein (919aa)
hypothetical protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI000361018F
DEAD/DEAH box helicase domain-containing protein
DEAD/DEAH box helicase domain-containing protein {ECO:0000313|EMBL:ADC46961.1}; TaxID=634498 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobrevibacter.;" source="Methanobrevibacter ruminantium (strain ATCC 35063 / DSM 1093 / JCM; 13430 / M1) (Methanobacterium ruminantium).;"
SR-VP_26_10_2019_2_100cm_scaffold_3526_13

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15379..15810
DNA (432bp) protein (144aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI00037AFA78
Polyketide cyclase/dehydrase
Tax=RBG_19FT_COMBO_Chloroflexi_50_10_curated
SR-VP_26_10_2019_2_100cm_scaffold_3526_14
unknown

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15947..18406
DNA (2460bp) protein (820aa)
aconitate hydratase (EC:4.2.1.3)
Aconitate hydratase 2 n=1 Tax=Pseudanabaena biceps PCC 7429 RepID=L8N2U0_9CYAN
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3526_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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18610..19311
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E972_METMS
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3526_16
unknown

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comp(19323..19490)
DNA (168bp) protein (56aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3526_17
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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19521..20702
DNA (1182bp) protein (394aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XKQ1_METZD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3526_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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20699..21442
DNA (744bp) protein (248aa)
CAAX amino terminal protease family n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6K1_METCZ
CAAX amino terminal protease
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3526_19
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21463..22281
DNA (819bp) protein (273aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_3526_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22377..22649
DNA (273bp) protein (91aa)
Chaperonin Cpn10 n=1 Tax=Methanospirillum hungatei JF-1 (strain ATCC 27890 / DSM 864 / NBRC 100397 / JF-1) RepID=Q2FPN6_METHJ
Co-chaperonin GroES {ECO:0000313|EMBL:KCZ71002.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
groES; co-chaperonin GroES
SR-VP_26_10_2019_2_100cm_scaffold_3526_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22651..24273
DNA (1623bp) protein (541aa)
Chaperonin GroL {ECO:0000313|EMBL:KCZ71001.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
groEL; molecular chaperone GroEL; K04077 chaperonin GroEL id=5041649 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
groEL; chaperonin GroEL
SR-VP_26_10_2019_2_100cm_scaffold_3526_22
unknown

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24591..24713
DNA (123bp) protein (41aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_3526_23
Methanofollis liminatans, Methanofollis, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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24715..25308
DNA (594bp) protein (198aa)
Membrane-flanked domain DUF304 n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1AR99_9EURY
Membrane-flanked domain DUF304 {ECO:0000313|EMBL:EJG07513.1}; Flags: Precursor;; TaxID=28892 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Methanofollis.;" source="Methanofollis liminatans DSM 4140.;"
membrane-flanked domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_3526_24
unknown

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comp(25378..26718)
DNA (1341bp) protein (447aa)
Probable cobyrinic acid A,C-diamide synthase n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1QIN3_METMZ
Cobyrinic acid A,C-diamide synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3526_25
Mollicutes bacterium HR2, Mollicutes, Tenericutes, Bacteria

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comp(26774..27007)
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:KFZ25522.1}; TaxID=1541960 species="Bacteria; Tenericutes; Mollicutes.;" source="Mollicutes bacterium HR2.;"
Putative uncharacterized protein id=3984532 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Oscillatoria taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_3526_26
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

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comp(27004..27285)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Leptonema illini DSM 21528 RepID=H2CJD3_9LEPT
hypothetical protein
Tax=RBG_13_Nitrospirae_39_12_curated
SR-VP_26_10_2019_2_100cm_scaffold_3526_27
unknown

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comp(27299..27526)
DNA (228bp) protein (76aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_3526_28
unknown

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27781..28236
DNA (456bp) protein (152aa)

This feature has no annotations

Displaying 29 items

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