ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_4717

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_4717_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1..603
DNA (603bp) protein (201aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1ABF0 related cluster n=1 Tax=unknown RepID=UPI0003D1ABF0
acetolactate synthase, large subunit
SR-VP_26_10_2019_2_100cm_scaffold_4717_2
unknown

Not on your lists

610..1110
DNA (501bp) protein (167aa)
ilvH; acetolactate synthase 3 regulatory subunit (EC:2.2.1.6)
Acetolactate synthase small subunit n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZ25_METMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4717_3
RIFOXYD2_FULL_Planctomycetes_41_16_curated, Planctomycetes, Bacteria

Not on your lists

comp(1138..1572)
DNA (435bp) protein (145aa)
Cytosine/adenosine deaminase n=1 Tax=Pleurocapsa sp. PCC 7327 RepID=K9T5M2_9CYAN
cytosine/adenosine deaminase
Tax=RIFOXYD2_FULL_Planctomycetes_41_16_curated
SR-VP_26_10_2019_2_100cm_scaffold_4717_4
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1606..1863)
DNA (258bp) protein (86aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4H5_METSW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG19215.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium paludis (strain DSM 25820 / JCM 18151 / SWAN1).;"
SR-VP_26_10_2019_2_100cm_scaffold_4717_5

Not on your lists

comp(1903..2163)
DNA (261bp) protein (87aa)
Putative uncharacterized protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D4H5_METSW
hypothetical protein
Tax=RBG_19FT_COMBO_Chloroflexi_48_23_curated
SR-VP_26_10_2019_2_100cm_scaffold_4717_6
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2184..2774)
DNA (591bp) protein (197aa)
Putative integral membrane sensor protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RG99_METP4
Uncharacterized protein {ECO:0000313|EMBL:KKG10209.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. 2.H.A.1B.4.;"
putative integral membrane sensor protein
SR-VP_26_10_2019_2_100cm_scaffold_4717_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2992..3576
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46CP2_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ70361.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_4717_8
unknown

Not on your lists

comp(3584..3712)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7H0_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4717_9
unknown

Not on your lists

comp(3719..4654)
DNA (936bp) protein (312aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VJ3_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4717_10
unknown

Not on your lists

comp(4656..5924)
DNA (1269bp) protein (423aa)
3-isopropylmalate dehydratase large subunit n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEK4_9EURY
3-isopropylmalate dehydratase, large subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4717_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5987..6691)
DNA (705bp) protein (235aa)
Transposase n=1 Tax=Ferroplasma sp. Type II RepID=T0MA23_9EURY
transposase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_4717_12
unknown

Not on your lists

7036..7407
DNA (372bp) protein (124aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4717_13
unknown

Not on your lists

7404..7811
DNA (408bp) protein (136aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4717_14
unknown

Not on your lists

comp(7837..8097)
DNA (261bp) protein (87aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4717_15
unknown

Not on your lists

comp(8310..8816)
DNA (507bp) protein (169aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4717_16
unknown

Not on your lists

comp(8873..9283)
DNA (411bp) protein (137aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4717_17
unknown

Not on your lists

comp(9581..11767)
DNA (2187bp) protein (729aa)
AAA family ATPase, CDC48 subfamily protein (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B6J8_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4717_18
unknown

Not on your lists

comp(11806..12330)
DNA (525bp) protein (175aa)
Heat shock protein Hsp20 n=1 Tax=Fervidicoccus fontis (strain DSM 19380 / VKM B-2539 / Kam940) RepID=I0A035_FERFK
heat shock protein Hsp20
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 18 items

View Taxonomy