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SR-VP_26_10_2019_2_100cm_scaffold_4905

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_4905_1

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comp(1..639)
DNA (639bp) protein (213aa)
Putative ABC transporter permease protein n=1 Tax=Gordonia namibiensis NBRC 108229 RepID=K6WYR4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGA13342.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
ABC transporter permease
SR-VP_26_10_2019_2_100cm_scaffold_4905_2
unknown

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1138..1371
DNA (234bp) protein (78aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4905_3
unknown

Not on your lists

1368..1637
DNA (270bp) protein (90aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4905_4
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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1947..2555
DNA (609bp) protein (203aa)
Protein pelota homolog n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXF9_METHD
putative translation factor pelota
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_4905_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2552..3220
DNA (669bp) protein (223aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPJ2_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ73492.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_4905_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3217..4092
DNA (876bp) protein (292aa)
Alpha-L-glutamate ligase, RimK family {ECO:0000313|EMBL:KCZ73493.1}; EC=6.3.2.33 {ECO:0000313|EMBL:KCZ73493.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Tetrahydromethanopterin:alpha-L-glutamate ligase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=MPTN_METMA
Tetrahydromethanopterin:alpha-L-glutamate ligase
SR-VP_26_10_2019_2_100cm_scaffold_4905_7
Methanosarcina horonobensis, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4095..5150)
DNA (1056bp) protein (352aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TI32_METAC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB76853.1}; TaxID=1434110 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina horonobensis HB-1 = JCM 15518.;"
SR-VP_26_10_2019_2_100cm_scaffold_4905_8
unknown

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comp(5300..5911)
DNA (612bp) protein (204aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4905_9
unknown

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comp(5883..6281)
DNA (399bp) protein (133aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4905_10
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6334..6561)
DNA (228bp) protein (76aa)
Helix-turn-helix-containing transcriptional regulator, XRE family n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VB5_METBU
XRE family transcriptional regulator {ECO:0000313|EMBL:KGK98483.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
XRE family transcriptional regulator
SR-VP_26_10_2019_2_100cm_scaffold_4905_11
unknown

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comp(6561..6965)
DNA (405bp) protein (135aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4905_12
unknown

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comp(6965..7399)
DNA (435bp) protein (145aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4905_13
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7396..7767)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VFT0_METM7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB44030.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
SR-VP_26_10_2019_2_100cm_scaffold_4905_14
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7764..8153)
DNA (390bp) protein (130aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_4905_15
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8174..8587)
DNA (414bp) protein (138aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_4905_16
unknown

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comp(8614..9030)
DNA (417bp) protein (139aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4905_17
unknown

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comp(9033..9449)
DNA (417bp) protein (139aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4905_18
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9446..9832)
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466H4_METBF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB44030.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
SR-VP_26_10_2019_2_100cm_scaffold_4905_19
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9842..10153)
DNA (312bp) protein (104aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12VB3_METBU
Uncharacterized protein {ECO:0000313|EMBL:KGK98486.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_4905_20
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10234..10620)
DNA (387bp) protein (129aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12WP4_METBU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE52132.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
SR-VP_26_10_2019_2_100cm_scaffold_4905_21
unknown

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comp(10756..11775)
DNA (1020bp) protein (340aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_4905_22
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(11828..12046)
DNA (219bp) protein (73aa)
Tax=CG_Pacearch_04
Displaying 22 items

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