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SR-VP_26_10_2019_2_100cm_scaffold_2068

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2068_1
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..479)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B594_METTP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK13868.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_2
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(481..1611)
DNA (1131bp) protein (377aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B593_METTP
PAS/PAC sensor signal transduction histidine kinase
PAS/PAC sensor signal transduction histidine kinase {ECO:0000313|EMBL:ABK13867.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_3
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1598..1987)
DNA (390bp) protein (130aa)
Response regulator receiver protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B592_METTP
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ABK13866.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_4
RBG_16_Chloroflexi_51_9_curated, Chloroflexi, Bacteria

Not on your lists

2397..2987
DNA (591bp) protein (197aa)
Heat shock protein Hsp20 n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G5D8_GEOUR
heat shock protein Hsp20
Tax=RBG_16_Chloroflexi_51_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_2068_5
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3031..3270
DNA (240bp) protein (80aa)
Gas vesicle structural protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B588_METTP
gas vesicle synthesis protein GvpA
Gas vesicle structural protein {ECO:0000256|HAMAP-Rule:MF_00576, ECO:0000256|RuleBase:RU000632}; Short=GVP {ECO:0000256|HAMAP-Rule:MF_00576};; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_6
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3306..3536
DNA (231bp) protein (77aa)
Gas vesicle structural protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B588_METTP
gas vesicle synthesis protein GvpA
Gas vesicle structural protein {ECO:0000256|HAMAP-Rule:MF_00576, ECO:0000256|RuleBase:RU000632}; Short=GVP {ECO:0000256|HAMAP-Rule:MF_00576};; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_7
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3572..4162
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B587_METTP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK13861.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_8
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4223..5269
DNA (1047bp) protein (349aa)
Gas vesicle protein GvpN n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B586_METTP
gas vesicle protein GvpN
Gas vesicle protein GvpN {ECO:0000313|EMBL:ABK13860.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_9
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5305..5640
DNA (336bp) protein (112aa)
Gas vesicle synthesis family protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B584_METTP
gas vesicle synthesis family protein
Gas vesicle synthesis family protein {ECO:0000313|EMBL:ABK13858.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_10
unknown

Not on your lists

5665..5829
DNA (165bp) protein (55aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2068_11
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5844..6647
DNA (804bp) protein (268aa)
Transcriptional regulator, PadR family n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B595_METTP
PadR-like family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:ABK13869.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_12
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6644..7285
DNA (642bp) protein (214aa)
GvpF n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FM6_METBF
GvpF
Gas vesicle protein GvpF {ECO:0000313|EMBL:AKB49918.1}; TaxID=1434109 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri str. Wiesmoor.;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_13
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7285..7572
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B597_METTP
Gas vesicle protein GvpG {ECO:0000313|EMBL:AKB83425.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2068_14
unknown

Not on your lists

7572..7784
DNA (213bp) protein (71aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2068_15
unknown

Not on your lists

7781..8509
DNA (729bp) protein (243aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2068_16
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8506..8862
DNA (357bp) protein (119aa)
Gas vesicle structural protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FM3_METBF
Gas vesicle protein gvpJ 1
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_17

Not on your lists

9019..9615
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FM2_METBF
Marine sediment metagenome DNA, contig: S01H1_S10091 {ECO:0000313|EMBL:GAG12549.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Gas vesicle protein GvpH, heat shock protein Hsp20
SR-VP_26_10_2019_2_100cm_scaffold_2068_18
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9596..9910
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FM1_METBF
Gas vesicle protein GvpK {ECO:0000313|EMBL:AKB83428.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri 3.;"
Gas vesicle protein GvpK
SR-VP_26_10_2019_2_100cm_scaffold_2068_19
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9907..10719
DNA (813bp) protein (271aa)
GvpL n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FM0_METBF
GvpL
GvpL {ECO:0000313|EMBL:AAZ69322.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina barkeri (strain Fusaro / DSM 804).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_20
uncultured Desulfobacterium sp., Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10716..11279
DNA (564bp) protein (188aa)
Gas vesicle structural protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YDZ4_9DELT
Gas vesicle structural protein {ECO:0000256|RuleBase:RU000632}; TaxID=201089 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium; environmental samples.;" source="uncultured Desulfobacterium sp.;"
gas vesicle protein GVPa
SR-VP_26_10_2019_2_100cm_scaffold_2068_21
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11332..11901)
DNA (570bp) protein (190aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI00036BA197
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK13854.1}; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta thermophila (strain DSM 6194 / PT) (Methanothrix; thermophila (strain DSM 6194 / PT)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_22
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(11932..14052)
DNA (2121bp) protein (707aa)
ATPase AAA (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I4U3_DESAP
Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
SR-VP_26_10_2019_2_100cm_scaffold_2068_23
Methanosalsum zhilinae, Methanosalsum, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14302..15309)
DNA (1008bp) protein (336aa)
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPM6_METZD
integral membrane sensor signal transduction histidine kinase
Integral membrane sensor signal transduction histidine kinase {ECO:0000313|EMBL:AEH61461.1}; TaxID=679901 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosalsum.;" source="Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5); (Methanohalophilus zhilinae).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15517..16323)
DNA (807bp) protein (269aa)
Site-determining protein n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=Q8TYS4_METKA
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:KCZ70622.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
chromosome partitioning ATPase
SR-VP_26_10_2019_2_100cm_scaffold_2068_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16370..17746
DNA (1377bp) protein (459aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70621.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_26
Thermodesulfobacterium geofontis, Thermodesulfobacterium, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

17922..19265
DNA (1344bp) protein (448aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:AEH22433.1}; EC=2.7.7.13 {ECO:0000313|EMBL:AEH22433.1};; TaxID=795359 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfobacterium.;" source="Thermodesulfobacterium geofontis (strain OPF15).;"
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Thermodesulfobacterium geofontis (strain OPB45) RepID=F8C3B9_THEGP
SR-VP_26_10_2019_2_100cm_scaffold_2068_27
unknown

Not on your lists

19551..19646
DNA (96bp) protein (32aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2068_28
Thermococcus kodakarensis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

19918..20196
DNA (279bp) protein (93aa)
Predicted nucleic acid-binding protein, containing PIN domain n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=Q5JFN3_THEKO
nucleic acid-binding protein
Predicted nucleic acid-binding protein, containing PIN domain {ECO:0000313|EMBL:BAD84401.1}; TaxID=69014 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1); (Pyrococcus kodakaraensis (strain KOD1)).;"
SR-VP_26_10_2019_2_100cm_scaffold_2068_29
unknown

Not on your lists

20243..20392
DNA (150bp) protein (50aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2068_30
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20847..21200
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q46FB8_METBF
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying items 1-30 of 31 in total

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