ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_2170

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2170_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..239)
DNA (237bp) protein (79aa)
ATPase, AAA family n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TLK7_METAC
Putative ATPase (AAA+ superfamily) {ECO:0000313|EMBL:KCZ72035.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ATPase AAA
SR-VP_26_10_2019_2_100cm_scaffold_2170_2
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(265..1305)
DNA (1041bp) protein (347aa)
Methionine synthase II (Cobalamin-independent) {ECO:0000313|EMBL:KCZ72036.1}; EC=2.1.1.14 {ECO:0000313|EMBL:KCZ72036.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MF55_9EURY
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_2170_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1419..1733)
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72582.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2170_4
unknown

Not on your lists

comp(1925..2341)
DNA (417bp) protein (139aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2170_5
Mycoplasma penetrans, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(2888..3220)
DNA (333bp) protein (111aa)
Putative uncharacterized protein MYPE3410 n=1 Tax=Mycoplasma penetrans (strain HF-2) RepID=Q8EW62_MYCPE
hypothetical protein
Putative uncharacterized protein MYPE3410 {ECO:0000313|EMBL:BAC44134.1}; TaxID=272633 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma.;" source="Mycoplasma penetrans (strain HF-2).;"
SR-VP_26_10_2019_2_100cm_scaffold_2170_6

Not on your lists

3449..3691
DNA (243bp) protein (81aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos31B6 RepID=Q64AL5_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83562.1}; TaxID=285369 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos31B6.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2170_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4065..4421
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71238.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2170_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4407..4625)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71237.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2170_9
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(4693..5739)
DNA (1047bp) protein (349aa)
Uncharacterized protein n=4 Tax=environmental samples RepID=T0MTP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB66596.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-plasma.;"
Transposase, IS4 family protein/SWIM domain fusion
SR-VP_26_10_2019_2_100cm_scaffold_2170_10
Thermoplasmatales archaeon E-plasma, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

5795..6100
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MYL2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EQB66597.1}; TaxID=667137 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales; environmental samples.;" source="Thermoplasmatales archaeon E-plasma.;"
SR-VP_26_10_2019_2_100cm_scaffold_2170_11
unknown

Not on your lists

comp(6217..6477)
DNA (261bp) protein (87aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2170_12
unknown

Not on your lists

comp(6584..6802)
DNA (219bp) protein (73aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2170_13
GWF2_Nitrospirae_44_13_curated, Nitrospirae, Bacteria

Not on your lists

comp(6841..7410)
DNA (570bp) protein (190aa)
Putative uncharacterized protein id=4128127 bin=GWF2_Nitrospirae_44_13 species=Dehalococcoides mccartyi genus=Dehalococcoides taxon_order=Dehalococcoidales taxon_class=Dehalococcoidia phylum=Chloroflexi tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
hypothetical protein
Tax=GWF2_Nitrospirae_44_13_curated
SR-VP_26_10_2019_2_100cm_scaffold_2170_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7955..8413)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MFD5_9EURY
Archaeal flagellin-like protein {ECO:0000313|EMBL:KCZ70975.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2170_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(8410..8628)
DNA (219bp) protein (73aa)
UPI0003D1C239 related cluster n=1 Tax=unknown RepID=UPI0003D1C239
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2170_trna_1
unknown

Not on your lists

9000..9073
DNA (74bp)
transferRNA Val
SR-VP_26_10_2019_2_100cm_scaffold_2170_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9403..10077
DNA (675bp) protein (225aa)
Putative Methyltransferase type 12 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YY44_9BACT
Methyltransferase family protein {ECO:0000313|EMBL:KCZ71958.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
type 12 methyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_2170_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

10282..10590
DNA (309bp) protein (103aa)
Large-conductance mechanosensitive channel n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HEH7_METFS
large-conductance mechanosensitive channel
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2170_18
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

10762..11298
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XNZ7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF58463.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2170_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11462..12757)
DNA (1296bp) protein (432aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JF96_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2170_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12958..13704)
DNA (747bp) protein (249aa)
Putative PAS/PAC sensor protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I8S2_METB6
Uncharacterized protein {ECO:0000313|EMBL:KCZ72012.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
PAS/PAC sensor protein
SR-VP_26_10_2019_2_100cm_scaffold_2170_trna_4
unknown

Not on your lists

comp(13805..13876)
DNA (72bp)
transferRNA Ala
SR-VP_26_10_2019_2_100cm_scaffold_2170_trna_2
unknown

Not on your lists

14005..14078
DNA (74bp)
transferRNA Ile
SR-VP_26_10_2019_2_100cm_scaffold_2170_21
unknown

Not on your lists

14315..14458
DNA (144bp) protein (48aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2170_22
unknown

Not on your lists

14464..14790
DNA (327bp) protein (109aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2170_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14887..16059)
DNA (1173bp) protein (391aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXC7_METHD
SR-VP_26_10_2019_2_100cm_scaffold_2170_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(16521..17174)
DNA (654bp) protein (218aa)
Putative Methyltransferase type 12 n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YY44_9BACT
Methyltransferase family protein {ECO:0000313|EMBL:KCZ71958.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
type 12 methyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_2170_25
unknown

Not on your lists

comp(17232..17396)
DNA (165bp) protein (55aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2170_trna_3
unknown

Not on your lists

comp(17419..17492)
DNA (74bp)
transferRNA Val
SR-VP_26_10_2019_2_100cm_scaffold_2170_26
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(18122..18424)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29172_ARCFU
addiction module toxin component, YafQ family/addiction module toxin, RelE/StbE family
Uncharacterized protein {ECO:0000313|EMBL:AAB90150.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM; 9628 / NBRC 100126).;"
Displaying items 1-30 of 34 in total

View Taxonomy