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SR-VP_26_10_2019_2_100cm_scaffold_2677

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2677_1
RBG_13_Aminicenantes_63_10_curated, Aminicenantes, Bacteria

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428..1741
DNA (1314bp) protein (438aa)
Phenylacetate-coenzyme A ligase (EC:6.2.1.30)
CapK related-protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CTC2_METMJ
Tax=RBG_13_Aminicenantes_63_10_curated
SR-VP_26_10_2019_2_100cm_scaffold_2677_2
unknown

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2757..2969
DNA (213bp) protein (71aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2677_3
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2932..3114
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PZ63_METMA
Protein-disulfide reductase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2677_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3133..3336
DNA (204bp) protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70390.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2677_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3360..3761
DNA (402bp) protein (134aa)
Cytochrome C and Quinol oxidase polypeptide I {ECO:0000313|EMBL:KCZ70389.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein id=3846461 bin=GWC2_Nitrospirae_57_13 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2677_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4168..4659
DNA (492bp) protein (164aa)
Ferredoxin subunit of nitrite reductase and ring-hydroxylating dioxygenase {ECO:0000313|EMBL:KCZ71204.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cytochrome b6-f complex iron-sulfur subunit id=1776694 bin=GWD2_Desulfuromonadales_54_10 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Desulfuromonadales_54_10 organism_group=Deltaproteobacteria
Rieske (2Fe-2S) domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_2677_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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4675..5481
DNA (807bp) protein (269aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RYM6_FERPA
Fe-S-cluster-containing hydrogenase subunit {ECO:0000313|EMBL:KCZ73531.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4Fe-4S ferredoxin iron-sulfur binding domain protein
SR-VP_26_10_2019_2_100cm_scaffold_2677_8
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(5506..6201)
DNA (696bp) protein (232aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTD5_METHD
methylase involved in ubiquinone/menaquinone biosynthesis
Tax=RBG_16_Chloroflexi_50_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_2677_9
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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comp(6201..6689)
DNA (489bp) protein (163aa)
Restriction endonuclease n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0B791_9ARCH
restriction endonuclease
Tax=RBG_16_Micrarchaeota_36_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_2677_10
CG_Micra_01, Micrarchaeota, Archaea

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6893..7372
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EB014
transposase, IS200 family
Tax=CG_Micra_01
SR-VP_26_10_2019_2_100cm_scaffold_2677_11
RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_49_13_curated, Kaiserbacteria, Parcubacteria, Bacteria

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comp(7369..7701)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BRH0_9FLAO
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Kaiserbacteria_49_13_curated
SR-VP_26_10_2019_2_100cm_scaffold_2677_12
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7724..9826)
DNA (2103bp) protein (701aa)
Copper-(Or silver)-translocating P-type ATPase {ECO:0000313|EMBL:AFD00370.1}; EC=3.6.3.4 {ECO:0000313|EMBL:AFD00370.1};; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7X0_METCZ
SR-VP_26_10_2019_2_100cm_scaffold_2677_13
unknown

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comp(10046..10318)
DNA (273bp) protein (91aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2677_14
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10372..10824)
DNA (453bp) protein (151aa)
Universal stress protein UspA and related nucleotide-binding protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7X1_METCZ
uspA-7; Universal stress protein UspA
Universal stress protein UspA and related nucleotide-binding protein {ECO:0000313|EMBL:AFD00371.1}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 /; HZ254).;"
SR-VP_26_10_2019_2_100cm_scaffold_2677_15
RBG_16_Chloroflexi_50_9_curated, Chloroflexi, Bacteria

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comp(10933..11598)
DNA (666bp) protein (222aa)
Hypothetical membrane protein id=1801697 bin=GWB2_Chloroflexi_54_36 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
hypothetical protein
Tax=RBG_16_Chloroflexi_50_9_curated
SR-VP_26_10_2019_2_100cm_scaffold_2677_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11601..11954)
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71439.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2677_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12198..12893
DNA (696bp) protein (232aa)
Cytochrome c assembly protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9L0_METEZ
ABC-type transport system involved in cytochrome c biogenesis, permease component {ECO:0000313|EMBL:KCZ70410.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
SR-VP_26_10_2019_2_100cm_scaffold_2677_18
unknown

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12920..13546
DNA (627bp) protein (209aa)
Transcriptional regulator n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HBA4_9EURY
lrp; Lrp/AsnC family transcription regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2677_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13551..14183
DNA (633bp) protein (211aa)
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:KCZ71819.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
methyltransferase type 11 id=14632213 bin=bin9_gal15 species=Nitrosomonas sp. AL212 genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
methyltransferase type 11
SR-VP_26_10_2019_2_100cm_scaffold_2677_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14253..15599
DNA (1347bp) protein (449aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70750.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2677_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15631..16995
DNA (1365bp) protein (455aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71078.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
4Fe-4S ferredoxin iron-sulfur binding domain protein id=2053776 bin=GWD2_Deltaproteobacteria_55_8 species=Desulfotomaculum ruminis genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2677_22
unknown

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comp(16992..17831)
DNA (840bp) protein (280aa)
UPI0003D1C401 related cluster n=1 Tax=unknown RepID=UPI0003D1C401
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2677_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17835..18128)
DNA (294bp) protein (98aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 23 items

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