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SR-VP_26_10_2019_2_100cm_scaffold_1452_21

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: comp(13200..14663)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWN8_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 484.0
  • Bit_score: 720
  • Evalue 9.00e-205
RNA-2',3'-PO4:RNA-5'-OH ligase similarity KEGG
DB: KEGG
  • Identity: 70.6
  • Coverage: 483.0
  • Bit_score: 724
  • Evalue 1.00e-206
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 482.0
  • Bit_score: 904
  • Evalue 6.10e-260

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Taxonomy

Sequences

DNA sequence
Length: 1464
ATGCCTGAAGAAAGAAAAGATGCTGCAAGCATTGTCACTAAAGTGAATGATTATACATGGGACATACCCATGACTTACAAACCCGGCATGAGAGTGCCCGGCCGTTTATTCGTCTCCCAGAAATTGCTTACGAACCTTGAGCATGACACGCTTGAGCAGACAGCCAATGTCGCAACCCTTCCCGGCATCCAGAAATATTCCATGGCAATGCCTGACGCCCACTCAGGCTACGGGTTCCCGATAGGAGGAGTCGCGGCGTTTGACAGGAATACCGGAATAATCAGCCCCGGCGGCGTGGGATACGATATCAACTGCGGCGTGCGTATTATCAGGACGAATCTGACTGCGGATGAAGTCCGCCCAGGGATGAAAGAACTTATCGAGCTTCTGTTCCATGAAATCCCCTCAGGCGTTGGCTCAAAAAGCAAGATTCGCGCCTCGGACAGTGAGCTGACCGATGCCTTCCTGCACGGCGCCAGATGGGCGGTGGAAAGCGGGTACGGCGTGAAAGAAGATATCGAACACTGCGAAGAGAACGGTTATATGAAATTTGCCGACCCCTCGAAAGTAAGCGAGAAGGCGCGAAACCGGGGTAAACCGCAGTTCGGGACCCTTGGCAGCGGCAATCATTTCCTTGAGGTGCAGTACGTCGATGAAGTGTACGACGAAAATGTTGCGAAGGTATTTGGTCTTCACAAAGGACAGGTCACGGTAATGGTACACTGCGGTTCGCGCGGCGCGGGCCACCAGATTTGTGATGATTACCTGAAGATTCTTGATAAAGCCACACGAAAATACGGCATTGTCCTGCCTGACAGGCAGCTTGCATGTGCCCCTGCGGAATCGCCTGAAGGCCAGAACTATTTTAAAGCCATGGCTGCGGGTGCAAATTATGCATGGGCGAACAGGCAGGTCATTACTCACTGGGTCAGGGAGGCGTTTACACGCTTTTTCAGGCGCGATATGGACGACCTGGGCATGAACCTCATTTACGACGTGGCGCATAACGTCGCCAAACTTGAAGAACATGTTATCGACGGAGAGAAAAAGATGGTGTATGTGCACCGCAAAGGTGCAACGCGGGCTTTCCCGCCCGGGCATCCCGATGTTCCGGCGGTATACAGGAAGGTGGGCCAGCCTGTTCTCATCCCGGGCAGCATGGGAACCCCGTCGTTTGTGCTGCACGGCACGCAGAAAGCCATGGAACTCACTTTCGGAAGCGCATGTCACGGCTCAGGCAGGGTATCAAGCCGTGCTGCTGCAAAGCGGGAATTTTATGGAGAGACTATTCAAAAAGAATTGGCTGCTAAAGGTATCACAGTGAGAGCAACGCACCCCTCCATAATAGCTGAAGAAGCCCCGGGAGTCTATAAATCGAGCGATGAAGTTGTGGACGTGGTGCACCAGTTGGGCATTGCCCGGAAAGTCGTGAAGCTTATGCCGATGGGAGTGGCGAAGGGATAG
PROTEIN sequence
Length: 488
MPEERKDAASIVTKVNDYTWDIPMTYKPGMRVPGRLFVSQKLLTNLEHDTLEQTANVATLPGIQKYSMAMPDAHSGYGFPIGGVAAFDRNTGIISPGGVGYDINCGVRIIRTNLTADEVRPGMKELIELLFHEIPSGVGSKSKIRASDSELTDAFLHGARWAVESGYGVKEDIEHCEENGYMKFADPSKVSEKARNRGKPQFGTLGSGNHFLEVQYVDEVYDENVAKVFGLHKGQVTVMVHCGSRGAGHQICDDYLKILDKATRKYGIVLPDRQLACAPAESPEGQNYFKAMAAGANYAWANRQVITHWVREAFTRFFRRDMDDLGMNLIYDVAHNVAKLEEHVIDGEKKMVYVHRKGATRAFPPGHPDVPAVYRKVGQPVLIPGSMGTPSFVLHGTQKAMELTFGSACHGSGRVSSRAAAKREFYGETIQKELAAKGITVRATHPSIIAEEAPGVYKSSDEVVDVVHQLGIARKVVKLMPMGVAKG*