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SR-VP_26_10_2019_2_100cm_scaffold_1452

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1452_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3..755
DNA (753bp) protein (251aa)
Putative metalloprotease n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KAW5_METBM
Putative metalloprotease {ECO:0000313|EMBL:KCZ72965.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative metalloprotease
SR-VP_26_10_2019_2_100cm_scaffold_1452_2
Methanosaeta concilii, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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833..1138
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BUI4_METCG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB67059.1}; TaxID=990316 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC; 103675 / OCM 69 / GP-6) (Methanothrix concilii).;"
SR-VP_26_10_2019_2_100cm_scaffold_1452_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1141..1638
DNA (498bp) protein (166aa)
4-hydroxybenzoate synthetase (Chorismate lyase) {ECO:0000313|EMBL:KCZ73394.1}; EC=4.1.3.40 {ECO:0000313|EMBL:KCZ73394.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TIG3_METAC
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1452_4
RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1951..2646)
DNA (696bp) protein (232aa)
Aspartate racemase id=3516334 bin=GWF2_Lentisphaerae_57_35 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
aspartate racemase
Tax=RIFOXYD12_FULL_Deltaproteobacteria_56_24_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_5
RBG_19FT_COMBO_Planctomycetes_48_8_curated, Physcisphaerae, Planctomycetes, Bacteria

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comp(2643..2960)
DNA (318bp) protein (106aa)
hypothetical protein n=1 Tax=Gallionella sp. SCGC AAA018-N21 RepID=UPI00036CF2B2
arr1; phosrestin
Tax=RBG_19FT_COMBO_Planctomycetes_48_8_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_6
unknown

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comp(2999..3814)
DNA (816bp) protein (272aa)
Methyltransferase type 11 id=2980918 bin=GWC2_Nitrospirae_57_13 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
type 11 methyltransferase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_7
unknown

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comp(3940..4035)
DNA (96bp) protein (32aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1452_8
unknown

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comp(4172..4606)
DNA (435bp) protein (145aa)
C_GCAxxG_C_C family protein n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GHS4_9FIRM
Marine sediment metagenome DNA, contig: S03H2_C00658 {ECO:0000313|EMBL:GAH23443.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1452_9
unknown

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comp(4877..5974)
DNA (1098bp) protein (366aa)
Carbamoyl-phosphate synthase small chain n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MJ02_9EURY
carbamoyl-phosphate synthase small subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_10
unknown

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6149..6313
DNA (165bp) protein (55aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1452_11

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comp(6336..6671)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LTU5_DESBD
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_12

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comp(6661..6981)
DNA (321bp) protein (107aa)
DNA polymerase beta domain protein region n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HT73_CYAP4
DNA polymerase beta domain-containing protein
Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7222..8577
DNA (1356bp) protein (452aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1B68B related cluster n=1 Tax=unknown RepID=UPI0003D1B68B
proA; gamma-glutamyl phosphate reductase
SR-VP_26_10_2019_2_100cm_scaffold_1452_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8543..9718
DNA (1176bp) protein (392aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQP4_METZD
SR-VP_26_10_2019_2_100cm_scaffold_1452_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9743..10246
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0F0_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70680.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1452_16
unknown

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10396..10872
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZN1_METPS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_17
unknown

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comp(10853..11131)
DNA (279bp) protein (93aa)
UPI0003D1C250 related cluster n=1 Tax=unknown RepID=UPI0003D1C250
RNA polymerase dimerization
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_18
unknown

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comp(11140..11892)
DNA (753bp) protein (251aa)
UPI0003D1C43C related cluster n=1 Tax=unknown RepID=UPI0003D1C43C
RNA-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_19
unknown

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comp(11916..12515)
DNA (600bp) protein (200aa)
methyltransferase (EC:2.1.1.-)
RNA methyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12W29_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_20
unknown

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comp(12517..13164)
DNA (648bp) protein (216aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_21
unknown

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comp(13200..14663)
DNA (1464bp) protein (488aa)
tRNA-splicing ligase RtcB n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWN8_METMA
RNA-2',3'-PO4:RNA-5'-OH ligase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_22
unknown

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comp(14732..15181)
DNA (450bp) protein (150aa)
Protein archease n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12U03_METBU
archease family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_23
unknown

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comp(15184..15480)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TN8_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_24
unknown

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15719..16126
DNA (408bp) protein (136aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1452_25
unknown

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16232..18151
DNA (1920bp) protein (640aa)
UPI0003D1BC26 related cluster n=1 Tax=unknown RepID=UPI0003D1BC26
Threonyl-tRNA synthetase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1452_26
Methanobacterium lacus, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(18225..18860)
DNA (636bp) protein (212aa)
TM2 domain-containing protein n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T8U7_METSL
TM2 domain-containing protein
TM2 domain-containing protein {ECO:0000313|EMBL:ADZ09775.1}; TaxID=877455 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium lacus (strain AL-21).;"
SR-VP_26_10_2019_2_100cm_scaffold_1452_27
CG_Elusi_05, Elusimicrobia, Bacteria

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comp(18912..20237)
DNA (1326bp) protein (442aa)
Putative uncharacterized protein n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5ICX0_ACIB4
hypothetical protein
Tax=CG_Elusi_05
SR-VP_26_10_2019_2_100cm_scaffold_1452_28
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(20339..21907)
DNA (1569bp) protein (523aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466N6_METBF
RNA-binding proteins (RRM domain)
RNA-binding proteins (RRM domain) {ECO:0000313|EMBL:AKB44281.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
SR-VP_26_10_2019_2_100cm_scaffold_1452_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22018..22737)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q465B9_METBF
Uncharacterized protein {ECO:0000313|EMBL:KCZ71805.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1452_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

22840..23316
DNA (477bp) protein (159aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72744.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Displaying items 1-30 of 35 in total

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