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SR-VP_26_10_2019_2_100cm_scaffold_8005_1

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_44_46

near complete RP 28 / 55 MC: 5 BSCG 21 / 51 MC: 1 ASCG 32 / 38
Location: comp(3..548)

Top 3 Functional Annotations

Value Algorithm Source
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 81.4
  • Coverage: 113.0
  • Bit_score: 200
  • Evalue 3.30e-49
DNA-directed RNA polymerase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRB7_METAC similarity UNIREF
DB: UNIREF100
  • Identity: 81.4
  • Coverage: 113.0
  • Bit_score: 200
  • Evalue 1.20e-48
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 89.8
  • Coverage: 118.0
  • Bit_score: 227
  • Evalue 1.20e-56

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Taxonomy

Sequences

DNA sequence
Length: 546
ATGGTAATAGCAACCCCAAAAAGAGTTAAACAGATAAAATTCGGACTTATTTCTCCCAAAGAATTCCGTAAGATGAGCGTAACAAGAGTCATAACGGCTGATACGTATGACGATGATGGTTTTCCGATTGAGATGGGATTGATGGATACAAAGCTCGGGGTGATCGACCCGGGCCTGCGCTGCAAGACATGCGGAGGACGCGCGGGCGAGTGCCCGGGACATTTCGGGCATATAGAGCTTGTGGCGCCCGTCATTCATGTAGGTTTTGCCAAGCTCATACGTAAGATTTTAAGGGCCACATGCAGGAAATGCGGCGCACTGCTTCTTGAACCCAAGCAGAAATCGATGTCCATCGCGCCACGCGAACACCAGTGCTCAATCCGGCCGCGCACCTGCGCCGGGCAGTCCGGGTTCAAACAACGCCAGTCCACGCCCTCGTCGCCTTCCACGATGCCCGGCGCGCGGGAAACCTTCGAGCCGCATTCAGGACACGTCTTGGGGAAAGGGAAGGCCTTCTCGTTGCCGGTACGCTGCCCCCGCACCACA
PROTEIN sequence
Length: 182
MVIATPKRVKQIKFGLISPKEFRKMSVTRVITADTYDDDGFPIEMGLMDTKLGVIDPGLRCKTCGGRAGECPGHFGHIELVAPVIHVGFAKLIRKILRATCRKCGALLLEPKQKSMSIAPREHQCSIRPRTCAGQSGFKQRQSTPSSPSTMPGARETFEPHSGHVLGKGKAFSLPVRCPRTT