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SR-VP_26_10_2019_2_100cm_scaffold_8005

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_8005_1
unknown

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comp(3..548)
DNA (546bp) protein (182aa)
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRB7_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8005_2
unknown

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comp(611..2425)
DNA (1815bp) protein (605aa)
rpoB1; DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRB6_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8005_3
unknown

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comp(2418..4013)
DNA (1596bp) protein (532aa)
rpoB2; DNA-directed RNA polymerase subunit beta'' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit B n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TRB5_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_8005_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4032..4289)
DNA (258bp) protein (86aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1B5D2 related cluster n=1 Tax=unknown RepID=UPI0003D1B5D2
DNA-directed RNA polymerase, subunit H
SR-VP_26_10_2019_2_100cm_scaffold_8005_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(4584..5423)
DNA (840bp) protein (280aa)
Chorismate dehydratase {ECO:0000256|HAMAP-Rule:MF_00995}; EC=4.2.1.151 {ECO:0000256|HAMAP-Rule:MF_00995};; Menaquinone biosynthetic enzyme MqnA {ECO:0000256|HAMAP-Rule:MF_00995}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QUZ5_ACEAZ
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_8005_6
Methanosarcina vacuolata, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5831..7051
DNA (1221bp) protein (407aa)
Hypothetical membrane protein n=1 Tax=uncultured archaeon RepID=D1JHX9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB45077.1}; TaxID=1434123 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina vacuolata Z-761.;"
SR-VP_26_10_2019_2_100cm_scaffold_8005_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7085..7387
DNA (303bp) protein (101aa)
UPF0235 protein Metho_2201 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L268_METHD
UPF0235 protein ANME2D_00529 {ECO:0000256|HAMAP-Rule:MF_00634}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
TIGR00251 family protein
SR-VP_26_10_2019_2_100cm_scaffold_8005_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7380..7805
DNA (426bp) protein (142aa)
UPF0292 protein Mzhil_1807 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQP3_METZD
UPF0292 protein ANME2D_00528 {ECO:0000256|HAMAP-Rule:MF_01095}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
TOPRIM domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_8005_9
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7943..8425
DNA (483bp) protein (161aa)
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] id=18248534 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
Displaying 9 items

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