ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_17268

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_17268_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3..416)
DNA (414bp) protein (138aa)
Protein-L-isoaspartate O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; EC=2.1.1.77 {ECO:0000256|HAMAP-Rule:MF_00090};; L-isoaspartyl protein carboxyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein L-isoaspartyl methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; Protein-beta-aspartate methyltransferase {ECO:0000256|HAMAP-Rule:MF_00090}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1B58D related cluster n=1 Tax=unknown RepID=UPI0003D1B58D
pcm-1; protein-L-isoaspartate O-methyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_17268_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(386..1057)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT92_METAC
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_17268_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1176..1523
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71970.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_17268_4
unknown

Not on your lists

1963..2250
DNA (288bp) protein (96aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_17268_5
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2464..3510
DNA (1047bp) protein (349aa)
Radical SAM n=1 Tax=Chlorobium ferrooxidans DSM 13031 RepID=Q0YQS0_9CHLB
Radical SAM domain protein {ECO:0000313|EMBL:AKB12401.1}; TaxID=523844 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina thermophila TM-1.;"
radical SAM additional 4Fe4S-binding domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_17268_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(3735..4259)
DNA (525bp) protein (175aa)
3-isopropylmalate dehydratase small subunit n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDU0_9EURY
leuD; 3-isopropylmalate dehydratase small subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_17268_7
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4308..4574)
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L3E0_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB50824.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_26_10_2019_2_100cm_scaffold_17268_8
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4608..4811)
DNA (204bp) protein (68aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JCA6_9ARCH
Mobile element protein {ECO:0000313|EMBL:AKB37983.1}; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina siciliae C2J.;"
transposase
Displaying 8 items

View Taxonomy