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SR-VP_26_10_2019_2_100cm_scaffold_172

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_172_1
unknown

Not on your lists

comp(1..879)
DNA (879bp) protein (293aa)
Peptidase U62 family protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XJ6_METBU
peptidase U62, modulator of DNA gyrase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_2
unknown

Not on your lists

comp(886..2814)
DNA (1929bp) protein (643aa)
lon; lon-related putative ATP-dependent protease (EC:3.4.21.-)
Lon-related putative ATP-dependent protease n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I956_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2995..4110
DNA (1116bp) protein (372aa)
Zinc metalloprotease n=2 Tax=Methanosarcina mazei RepID=M1QIE6_METMZ
Zn-dependent protease {ECO:0000313|EMBL:KCZ71050.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_172_4
unknown

Not on your lists

4112..5377
DNA (1266bp) protein (422aa)
UPI0003D1A495 related cluster n=1 Tax=unknown RepID=UPI0003D1A495
Pheromone shutdown protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_5
unknown

Not on your lists

comp(5556..5939)
DNA (384bp) protein (128aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_172_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

6472..7599
DNA (1128bp) protein (376aa)
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:KCZ71994.1}; EC=1.1.1.85 {ECO:0000313|EMBL:KCZ71994.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
3-isopropylmalate dehydrogenase n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TU72_METAC
leuB; 3-isopropylmalate dehydrogenase
SR-VP_26_10_2019_2_100cm_scaffold_172_7
unknown

Not on your lists


7765..8445
DNA (681bp) protein (227aa)
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KUJ9_METHD
Fibrillarin
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_8
unknown

Not on your lists

8535..9182
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YUG8_METPS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_9
unknown

Not on your lists

9185..9397
DNA (213bp) protein (71aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_172_10
unknown

Not on your lists

9402..10268
DNA (867bp) protein (289aa)
30S ribosomal protein S6 modification protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W5G4_UNCMA
rimK; 30S ribosomal protein S6 modification protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_11
unknown

Not on your lists

comp(10263..10733)
DNA (471bp) protein (157aa)
ribosomal-protein-alanine acetyltransferase (EC:2.3.1.128)
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Bacteroides cellulosilyticus CL02T12C19 RepID=I8VM59_9BACE
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_12
unknown

Not on your lists

comp(10703..11110)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL22_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_13
unknown

Not on your lists

comp(11142..11540)
DNA (399bp) protein (133aa)
Putative universal stress protein A n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2C1_UNCMA
uspA-6; putative universal stress protein A
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_14
unknown

Not on your lists

comp(11633..12667)
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQ98_METZD
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_15
unknown

Not on your lists

comp(13074..13649)
DNA (576bp) protein (192aa)
Putative uncharacterized protein n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RGH5_METVM
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_16
unknown

Not on your lists

comp(13651..13971)
DNA (321bp) protein (107aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_17
unknown

Not on your lists

comp(13964..14440)
DNA (477bp) protein (159aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_18
unknown

Not on your lists

comp(14614..14829)
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SUQ9_CLOC7
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14948..16231
DNA (1284bp) protein (428aa)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120};; EC=4.1.1.20 {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Diaminopimelate decarboxylase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAT6_METEZ
diaminopimelate decarboxylase
SR-VP_26_10_2019_2_100cm_scaffold_172_20
unknown

Not on your lists

comp(16271..16666)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos33H6 RepID=Q649Z9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KKN28749.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_172_21

Not on your lists

comp(16645..17076)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos33H6 RepID=Q64A00_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83777.1}; TaxID=285376 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos33H6.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_172_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17232..17666)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1PCB5_METMZ
Putative DNA-binding protein with PD1-like DNA-binding motif {ECO:0000313|EMBL:KCZ70669.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_172_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17773..18270
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Methanosarcina mazei Tuc01 RepID=M1Q511_METMZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ71222.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_172_24
unknown

Not on your lists

comp(18267..18995)
DNA (729bp) protein (243aa)
7-carboxy-7-deazaguanine synthase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7Q2_METCZ
Organic radical activating enzyme
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_25
unknown

Not on your lists

comp(19005..20096)
DNA (1092bp) protein (364aa)
Cell division protein FtsZ n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UQ3_METBU
cell division protein FtsZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_26
unknown

Not on your lists

comp(20109..21491)
DNA (1383bp) protein (461aa)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EAD5_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_27
unknown

Not on your lists

comp(21530..21793)
DNA (264bp) protein (88aa)
UPI0003D1A130 related cluster n=1 Tax=unknown RepID=UPI0003D1A130
PRC-barrel domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_28
unknown

Not on your lists

comp(21859..24081)
DNA (2223bp) protein (741aa)
AAA family ATPase, CDC48 subfamily protein (EC:3.6.4.6)
AAA family ATPase, CDC48 subfamily n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5A5_METTP
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_172_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24305..24496)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQC0_METH6
Uncharacterized protein {ECO:0000313|EMBL:KCZ71972.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_172_30
unknown

Not on your lists

24682..24915
DNA (234bp) protein (78aa)
hypothetical protein n=1 Tax=Hippea alviniae RepID=UPI0003B3D4CC
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 86 in total

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