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SR-VP_26_10_2019_2_100cm_scaffold_506

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_506_1
unknown

Not on your lists

comp(2..181)
DNA (180bp) protein (60aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_506_2
unknown

Not on your lists

comp(298..612)
DNA (315bp) protein (105aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_506_3
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(726..2240)
DNA (1515bp) protein (505aa)
aspartate ammonia-lyase (EC:4.3.1.1)
Fumarate hydratase class II id=1874346 bin=GWA2_Planctomycetia_40_7 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWA2_Planctomycetia_40_7 organism_group=Planctomycetes
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_506_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(2225..3580)
DNA (1356bp) protein (452aa)
Bifunctional hexulose-6-phosphate synthase/ribonuclease regulator n=1 Tax=Methanolobus psychrophilus R15 RepID=K4ME09_9EURY
bifunctional hexulose-6-phosphate synthase/ribonuclease regulator
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_506_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

3783..4352
DNA (570bp) protein (190aa)
ABC transporter, ATPase subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XA3_METBU
ABC heme exporter, ATPase subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_506_6
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

4349..5038
DNA (690bp) protein (230aa)
UPI0003D1C721 related cluster n=1 Tax=unknown RepID=UPI0003D1C721
ABC heme exporter, inner membrane subunit B
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_506_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

5085..5783
DNA (699bp) protein (233aa)
Heme exporter protein C n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TQV9_METAC
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_506_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists


comp(5812..6399)
DNA (588bp) protein (196aa)
30S ribosomal protein S3Ae n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BW87_METCG
rpsC; 30S ribosomal protein S3Ae
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_506_trna_1
unknown

Not on your lists

6551..6633
DNA (83bp)
transferRNA Leu
SR-VP_26_10_2019_2_100cm_scaffold_506_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6652..7203)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Thermofilum sp. 1910b RepID=S5Z8N7_9CREN
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:KCZ72600.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_506_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(7205..7516)
DNA (312bp) protein (104aa)
CutA1 divalent ion tolerance protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RE34_ARCPA
Uncharacterized protein {ECO:0000313|EMBL:KCZ72601.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CutA1 divalent ion tolerance protein
SR-VP_26_10_2019_2_100cm_scaffold_506_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7585..9279
DNA (1695bp) protein (565aa)
Peptidase M50 family protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12Z71_METBU
peptidase M50
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_506_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9327..10145)
DNA (819bp) protein (273aa)
ABC-type Mn2+/Zn2+ transport system, permease component {ECO:0000313|EMBL:KCZ73162.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC-3 protein id=2230966 bin=GWB2_Clostridiales_37_7 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
ABC uptake transporter permease
SR-VP_26_10_2019_2_100cm_scaffold_506_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10147..10887)
DNA (741bp) protein (247aa)
ATPase component of Mn/Zn ABC-type transporter {ECO:0000313|EMBL:KCZ73163.1}; EC=3.6.3.- {ECO:0000313|EMBL:KCZ73163.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ycdI; zinc ABC transporter ATP-binding protein YcdI (EC:3.6.3.-)
Zinc ABC transporter ATP-binding protein YcdI n=1 Tax=Bacillus sonorensis L12 RepID=M5P4E0_9BACI
SR-VP_26_10_2019_2_100cm_scaffold_506_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10880..11782)
DNA (903bp) protein (301aa)
Periplasmic solute binding protein family n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VJC7_9FIRM
ABC-type metal ion transport system, periplasmic component/surface adhesin {ECO:0000313|EMBL:KCZ73164.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ABC-type metal ion transport system, periplasmic component/surface adhesin
SR-VP_26_10_2019_2_100cm_scaffold_506_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11784..12218)
DNA (435bp) protein (145aa)
Metal dependent transcriptional regulator n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWP9_METPS
Mn-dependent transcriptional regulator {ECO:0000313|EMBL:KCZ73165.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
metal dependent transcriptional regulator
SR-VP_26_10_2019_2_100cm_scaffold_506_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12302..13174)
DNA (873bp) protein (291aa)
Sec-independent protein translocase, protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q469I3_METBF
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Twin-arginine translocation protein TatC
SR-VP_26_10_2019_2_100cm_scaffold_506_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13176..13988)
DNA (813bp) protein (271aa)
Probable L-aspartate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01265}; EC=1.4.1.21 {ECO:0000256|HAMAP-Rule:MF_01265};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
L-aspartate dehydrogenase (EC:1.4.1.21)
UPI0003D1A533 related cluster n=1 Tax=unknown RepID=UPI0003D1A533
SR-VP_26_10_2019_2_100cm_scaffold_506_18
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14066..14887
DNA (822bp) protein (274aa)
Quinolinate phosphoribosyltransferase (decarboxylating) (EC:2.4.2.19)
Nicotinate-nucleotide pyrophosphorylase [carboxylating] n=2 Tax=Methanosarcina mazei RepID=M1Q597_METMZ
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_506_19
unknown

Not on your lists

comp(14932..15474)
DNA (543bp) protein (181aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_506_20
unknown

Not on your lists

15669..16496
DNA (828bp) protein (276aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_506_trna_2
unknown

Not on your lists

16596..16670
DNA (75bp)
transferRNA Pro
SR-VP_26_10_2019_2_100cm_scaffold_506_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

16934..17182
DNA (249bp) protein (83aa)
Redox-active disulfide protein 1 n=1 Tax=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) RepID=A9A928_METM6
Alkyl hydroperoxide reductase, large subunit {ECO:0000313|EMBL:KCZ73523.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
redox-active disulfide protein 1
SR-VP_26_10_2019_2_100cm_scaffold_506_22
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17213..17623)
DNA (411bp) protein (137aa)
Probable ribonuclease VapC id=2184150 bin=GWB2_Nitrospirae_rel_47_37 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
PilT domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_506_23
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17626..17859)
DNA (234bp) protein (78aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_506_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17964..18713)
DNA (750bp) protein (250aa)
Carbon monoxide dehydrogenase/acetyl-CoA synthase complex, nickel-inserting subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12XL4_METBU
CO dehydrogenase maturation factor {ECO:0000313|EMBL:KCZ72766.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
cobyrinic acid a,c-diamide synthase
SR-VP_26_10_2019_2_100cm_scaffold_506_25
unknown

Not on your lists

comp(18884..19312)
DNA (429bp) protein (143aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_506_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19382..20791)
DNA (1410bp) protein (470aa)
Acetyl-CoA decarbonylase/synthase complex subunit beta {ECO:0000256|HAMAP-Rule:MF_01138}; Short=ACDS complex subunit beta {ECO:0000256|HAMAP-Rule:MF_01138};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01138};; ACDS complex acyltransferase {ECO:0000256|HAMAP-Rule:MF_01138}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
acetyl-CoA decarbonylase/synthase subunit beta (EC:2.3.1.- 2.3.1.169)
Acetyl-CoA decarbonylase/synthase complex subunit beta n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EBX2_METMS
SR-VP_26_10_2019_2_100cm_scaffold_506_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(20838..21455)
DNA (618bp) protein (206aa)
Acetyl-CoA decarbonylase/synthase complex subunit epsilon n=2 Tax=Methanosaeta concilii RepID=ACDE_METCN
cdhB; CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_506_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21452..23824)
DNA (2373bp) protein (791aa)
Acetyl-CoA decarbonylase/synthase complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01137}; Short=ACDS complex subunit alpha {ECO:0000256|HAMAP-Rule:MF_01137};; EC=1.2.99.2 {ECO:0000256|HAMAP-Rule:MF_01137};; ACDS complex carbon monoxide dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01137}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acetyl-CoA decarbonylase/synthase complex subunit alpha n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYY5_METHD
CO dehydrogenase/acetyl-CoA synthase complex, epsilon subunit
Displaying items 1-30 of 57 in total

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