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SR-VP_26_10_2019_2_100cm_scaffold_2422

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2422_1
unknown

Not on your lists

1..735
DNA (735bp) protein (245aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HIG2_ACIS0
AAA family ATPase, CDC48 subfamily
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2422_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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854..1111
DNA (258bp) protein (86aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2422_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(1114..2004)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q468W4_METBF
TIGR00269 family protein {ECO:0000313|EMBL:KCZ73157.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2422_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2186..3163
DNA (978bp) protein (326aa)
Hypothetical conserved protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5STY2_9BACT
Formate-dependent nitrite reductase, periplasmic cytochrome c552 subunit {ECO:0000313|EMBL:KCZ73533.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2422_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

3173..4270
DNA (1098bp) protein (366aa)
DnaJ-class molecular chaperone with C-terminal Zn finger domain {ECO:0000313|EMBL:KCZ73534.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein id=14622917 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin5_DeltaP organism_group=Deltaproteobacteria
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2422_6
unknown

Not on your lists

comp(4429..5190)
DNA (762bp) protein (254aa)
cytochrome B n=1 Tax=Desulfitobacterium hafniense RepID=UPI000371C8F1
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2422_7
unknown

Not on your lists

comp(5194..6150)
DNA (957bp) protein (319aa)
Formate dehydrogenase-like protein cytochrome b subunit n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJ59_IGNAJ
Formate dehydrogenase-like protein cytochrome b subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2422_8
unknown

Not on your lists

6354..7049
DNA (696bp) protein (232aa)
Uncharacterized protein n=2 Tax=Methanosarcina mazei RepID=M1PVI7_METMZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2422_9
unknown

Not on your lists

7086..7916
DNA (831bp) protein (277aa)
Rhomboid family protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MGT7_9EURY
rhomboid family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2422_10
unknown

Not on your lists

comp(7910..8260)
DNA (351bp) protein (117aa)
Copper amine oxidase family protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KVN9_9FIRM
copper amine oxidase family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2422_11
unknown

Not on your lists


8633..9103
DNA (471bp) protein (157aa)
Transcription elongation factor Spt5 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0M7_METHD
ribosomal protein L24p/L26e, archaeal
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2422_12
unknown

Not on your lists


9125..9607
DNA (483bp) protein (161aa)
UPI0003D1A188 related cluster n=1 Tax=unknown RepID=UPI0003D1A188
50S ribosomal protein L11
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2422_13
unknown

Not on your lists

comp(9809..9994)
DNA (186bp) protein (62aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2422_14
unknown

Not on your lists

comp(9991..10272)
DNA (282bp) protein (94aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2422_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10575..10757
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73502.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2422_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10754..10915
DNA (162bp) protein (54aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_2422_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11004..11243
DNA (240bp) protein (80aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Nucleic acid-binding protein n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9UZ53_PYRAB
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2422_18
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11261..12556)
DNA (1296bp) protein (432aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6Z6_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71769.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2422_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12553..13299)
DNA (747bp) protein (249aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E6Z5_METMS
Uncharacterized protein {ECO:0000313|EMBL:KCZ71768.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2422_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13296..13763)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEF1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KCZ71767.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2422_21
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13768..14511)
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNV4_METZD
Uncharacterized protein {ECO:0000313|EMBL:KCZ71766.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2422_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(14511..15089)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E853_METEZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ71765.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2422_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15089..15592)
DNA (504bp) protein (168aa)
UPI0003D1B578 related cluster n=1 Tax=unknown RepID=UPI0003D1B578
Uncharacterized protein {ECO:0000313|EMBL:KCZ71764.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_2422_24
unknown

Not on your lists


comp(15926..16237)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I874_METCZ
rps10p; 30S ribosomal protein S10
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2422_25
unknown

Not on your lists

comp(16272..17540)
DNA (1269bp) protein (423aa)
Elongation factor 1-alpha n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L124_METHD
translation elongation factor EF-1 alpha
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2422_26
unknown

Not on your lists

comp(17615..19723)
DNA (2109bp) protein (703aa)
Elongation factor 2 n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXB8_METHD
translation elongation factor aEF-2
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 26 items

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