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SR-VP_26_10_2019_2_100cm_scaffold_170_19

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: comp(14793..16256)

Top 3 Functional Annotations

Value Algorithm Source
tRNA-splicing ligase RtcB n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWN8_METMA similarity UNIREF
DB: UNIREF100
  • Identity: 70.9
  • Coverage: 484.0
  • Bit_score: 724
  • Evalue 4.70e-206
RNA-2',3'-PO4:RNA-5'-OH ligase similarity KEGG
DB: KEGG
  • Identity: 70.8
  • Coverage: 483.0
  • Bit_score: 726
  • Evalue 4.60e-207
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 482.0
  • Bit_score: 899
  • Evalue 2.00e-258

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Taxonomy

RBG_16_Euryarchaeota_41_19_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 1464
ATGCCTGAAGAAAGAAAAGATGCTGCAAGTATCGTCACAAAAGTGAATGATTATACATGGGACATACCCATGACATATAAACCCGGCATGAGAGTGCCCGGACGCTTATTTGTCTCCCAGAAATTACTTACGAACCTTGAGCATGACACGCTTGAGCAGACAGCCAATGTCGCAACCCTCCCCGGCATCCAGAAATATTCCATGGCAATGCCTGACGCCCACTCCGGCTACGGGTTCCCGATAGGAGGAGTTGCGGCGTTTGACAGGAATACCGGAATAATCAGCCCCGGCGGCGTGGGATACGATATCAACTGCGGCGTGCGTATAATCAGGACGAATCTGACTGCGGATGAAGTCCGCCCGAGGATGAAAGAACTTATTGAGCTTCTTTTCCATGAAATCCCTTCAGGCGTTGGTTCAAAAAGCAAGATTCGCGCTTCGGACAGTGAGCTGACAGATGCCTTCCTTCACGGCGCAAAATGGGCGGTGGAAAGCGGGTACGGCGTTCCGGAAGATATCGAGCACTGCGAAGAGAACGGTTTTATGAAATTTGCCGACCCCTCCAAAGTGAGTGAGAAGGCGCGAAACCGGGGCAAACCGCAGTTCGGGACCCTTGGCAGCGGCAACCATTTCCTTGAGGTGCAGTACGTGGATGAAGTGTACGATGAAGAGGTTGCGAAGGTCTTTGGTCTTCACAAAGGGCAGGTCACGGTCATGGTACATTGCGGTTCGCGCGGCGCAGGTCACCAGATTTGCGATGATTACCTGAAGATTCTTGATAAAGCCACACGAAAATACGGCATTGTCCTGCCTGACAGGCAGCTTGCATGCGCGCCTGCGGAATCGCCTGAAGGGCAGAACTATTTTAAAGCCATGGCTGCCGGGGCAAATTATGCATGGGCGAACAGGCAGGTCATTACCCACTGGGTGAGGGAAGCGTTTACACGCTTTTTCAGGCGCGATATGGATGACCTGGGAATGAACCTCATCTATGACGTAGCGCATAACGTTGCCAAGCTTGAAGAGCATGTTATTGACGGAGAGAAAAAGATGGTGTATGTGCACCGCAAAGGTGCAACAAGGGCTTTCCCGCCAGGGCATCCCGATGTGCCAGCGGTTTATAGAAAAGTCGGTCAGCCAGTTCTCATCCCGGGCAGCATGGGAACGCCATCTTTTGTGCTGCACGGCACGGAGAAAGCGATGGAACTCACTTTCGGGAGTGCATGCCACGGCTCGGGCAGGGTTTCAAGCCGTGCGGCTGCAAAGCGGGAATTTTATGGAGAGACTATTCAAAAAGAATTGGCTGCTAAAGGTATCACAGTGAGAGCAACGCACCCGTCCATAATAGCGGAAGAAGCTCCGGGAGTCTATAAATCAAGCGATGAAGTGGTGGACGTGGTACACCAGCTGGGCATTGCCAGGAAAGTCGTGAAGCTTATGCCGATGGGAGTGGCAAAGGGATAA
PROTEIN sequence
Length: 488
MPEERKDAASIVTKVNDYTWDIPMTYKPGMRVPGRLFVSQKLLTNLEHDTLEQTANVATLPGIQKYSMAMPDAHSGYGFPIGGVAAFDRNTGIISPGGVGYDINCGVRIIRTNLTADEVRPRMKELIELLFHEIPSGVGSKSKIRASDSELTDAFLHGAKWAVESGYGVPEDIEHCEENGFMKFADPSKVSEKARNRGKPQFGTLGSGNHFLEVQYVDEVYDEEVAKVFGLHKGQVTVMVHCGSRGAGHQICDDYLKILDKATRKYGIVLPDRQLACAPAESPEGQNYFKAMAAGANYAWANRQVITHWVREAFTRFFRRDMDDLGMNLIYDVAHNVAKLEEHVIDGEKKMVYVHRKGATRAFPPGHPDVPAVYRKVGQPVLIPGSMGTPSFVLHGTEKAMELTFGSACHGSGRVSSRAAAKREFYGETIQKELAAKGITVRATHPSIIAEEAPGVYKSSDEVVDVVHQLGIARKVVKLMPMGVAKG*