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SR-VP_26_10_2019_2_100cm_scaffold_170

Search features with annotation key words

Displaying items 1-30 of 81 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_170_1
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(207..1955)
DNA (1749bp) protein (583aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LN48_THEBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADT85187.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (strain DSM 11836 / MP).;"
SR-VP_26_10_2019_2_100cm_scaffold_170_2
Methanocaldococcus jannaschii, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(2186..2752)
DNA (567bp) protein (189aa)
Uncharacterized adenine-specific methylase MJECS02; EC=2.1.1.72;; TaxID=243232 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 /; JCM 10045 / NBRC 100440) (Methanococcus jannaschii).;"
Uncharacterized adenine-specific methylase MJECS02 n=1 Tax=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) RepID=Y3402_METJA
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_170_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3216..3563)
DNA (348bp) protein (116aa)
Peptidyl-tRNA hydrolase {ECO:0000313|EMBL:KCZ72578.1}; EC=3.1.1.29 {ECO:0000313|EMBL:KCZ72578.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1AE9B related cluster n=1 Tax=unknown RepID=UPI0003D1AE9B
peptidyl-tRNA hydrolase
SR-VP_26_10_2019_2_100cm_scaffold_170_4
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3579..3920)
DNA (342bp) protein (114aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_170_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3971..4579)
DNA (609bp) protein (203aa)
UPI0003D1ACD3 related cluster n=1 Tax=unknown RepID=UPI0003D1ACD3
Uncharacterized protein {ECO:0000313|EMBL:KCZ70758.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Protein clustered with O-phosphoseryl-tRNA(Cys) synthetase
SR-VP_26_10_2019_2_100cm_scaffold_170_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(4585..6003)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Prochlorothrix hollandica RepID=UPI00037E4EC3
cell surface protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

6124..6441
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos17F1 RepID=Q64DR2_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6422..6724)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I852_METCZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ72149.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_170_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(6874..8463)
DNA (1590bp) protein (530aa)
Archaeal glutamate synthase [NADPH] n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B9A6_METTP
ferredoxin-dependent glutamate synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_10
unknown

Not on your lists

8705..8872
DNA (168bp) protein (56aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_170_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8966..10321
DNA (1356bp) protein (452aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1B68B related cluster n=1 Tax=unknown RepID=UPI0003D1B68B
proA; gamma-glutamyl phosphate reductase
SR-VP_26_10_2019_2_100cm_scaffold_170_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10287..11450
DNA (1164bp) protein (388aa)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XQP4_METZD
SR-VP_26_10_2019_2_100cm_scaffold_170_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11475..11981
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0F0_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70680.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_170_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

12011..12493
DNA (483bp) protein (161aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZN1_METPS
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12474..12752)
DNA (279bp) protein (93aa)
UPI0003D1C250 related cluster n=1 Tax=unknown RepID=UPI0003D1C250
RNA polymerase dimerization
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_16
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12761..13504)
DNA (744bp) protein (248aa)
UPI0003D1C43C related cluster n=1 Tax=unknown RepID=UPI0003D1C43C
RNA-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13528..14127)
DNA (600bp) protein (200aa)
Putative RNA methylase {ECO:0000313|EMBL:KCZ70676.1}; EC=2.1.1.- {ECO:0000313|EMBL:KCZ70676.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ribosomal L11 methyltransferase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9E5_METEZ
ribosomal L11 methyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_170_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(14124..14774)
DNA (651bp) protein (217aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(14793..16256)
DNA (1464bp) protein (488aa)
tRNA-splicing ligase RtcB n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=Q8PWN8_METMA
RNA-2',3'-PO4:RNA-5'-OH ligase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(16325..16774)
DNA (450bp) protein (150aa)
Protein archease n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12U03_METBU
archease family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(16777..17073)
DNA (297bp) protein (99aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TN8_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(17222..17371)
DNA (150bp) protein (50aa)
30S ribosomal protein S27ae n=4 Tax=Methanosarcina RepID=RS27A_METAC
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
30S ribosomal protein S27
SR-VP_26_10_2019_2_100cm_scaffold_170_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17377..17862)
DNA (486bp) protein (162aa)
30S ribosomal protein S24e n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I896_METCZ
rps24e; 30S ribosomal protein S24
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_24
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(17865..18398)
DNA (534bp) protein (178aa)
UPF0218 protein Mbur_2282 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Y2282_METBU
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_25
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(18400..18585)
DNA (186bp) protein (62aa)
Transcription elongation factor Spt4 n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BU98_METCG
rpoE2; DNA-directed RNA polymerase subunit E'
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_170_26
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists


comp(18585..19220)
DNA (636bp) protein (212aa)
DNA-directed RNA polymerase subunit E' (EC:2.7.7.6)
DNA-directed RNA polymerase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPS9_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19231..19611)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XPS8_METZD
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_170_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists


comp(19608..20837)
DNA (1230bp) protein (410aa)
UPI0003D1B529 related cluster n=1 Tax=unknown RepID=UPI0003D1B529
translation initiation factor IF-2 subunit gamma
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_170_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21255..21683)
DNA (429bp) protein (143aa)
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:KCZ72375.1}; EC=2.3.1.1 {ECO:0000313|EMBL:KCZ72375.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acetyltransferase, N-acetylglutamate synthase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L275_METHD
GCN5-related N-acetyltransferase
SR-VP_26_10_2019_2_100cm_scaffold_170_30
unknown

Not on your lists

comp(21740..22588)
DNA (849bp) protein (283aa)

This feature has no annotations

Displaying items 1-30 of 81 in total

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