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SR-VP_26_10_2019_2_100cm_scaffold_1381_3

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: comp(3421..4317)

Top 3 Functional Annotations

Value Algorithm Source
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.3
  • Coverage: 298.0
  • Bit_score: 542
  • Evalue 2.90e-151
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB26_METMS similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 298.0
  • Bit_score: 488
  • Evalue 4.60e-135
pyridoxal phosphate synthase yaaD subunit similarity KEGG
DB: KEGG
  • Identity: 82.2
  • Coverage: 298.0
  • Bit_score: 488
  • Evalue 1.30e-135

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Taxonomy

Candidatus Methanoperedens nitroreducens → Candidatus Methanoperedens → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 897
ATGCAGCTTGAAAATCTAAGACACGGCACAGAACTCATAAAGCGCGGTTTTGCGAAGATGCAAAAAGGCGGGGTAATCATGGACGTCACAACGCCAGAGGAAGCCCTGATAGCGGAAAGAGCGGGCGCGGTGGCTGTGATGGCGCTTCATGCAGTACCTGCCGATATCAGGAAGGCAGGCGGGGTTGCAAGAATGGCTGACCCGCAGGTGATTGCGGCTATCATTGATTCTGTTACCATACCGGTAATGGCAAAAGCGCGCATCGGGCATTTTGTCGAGGCTGAAATCCTCGAGGCGCTTGGCGTTGACATGGTGGATGAGTCCGAGGTGCTTACGCCTGCGGATGAGAGCTTCCATATCGACAAGACCGGATTCACTATACCTTTTGTATGCGGGGCAAGGGATTTAGGCGAGGCGCTTCGTAGGATGAACGAAGGCGCGGCGATGATACGGACAAAGGGTGAAGCCGGAACAGGCGATGTGAAAGAGGCTGTGAGGCACATGCGCGCAATCATGGGCGCAATAAGGGAGCTTAAAGGTAAAAGCCAGGAAGAACTGATCGCAGTTGCGCGCAAAATCGAAGCCCCGATTGAGCTTGTTAAAGAAACCGCCAAATTGCAGCGGCTTCCTGTGGTGAACTTCGCCGCCGGCGGCATTGCCACGCCTGCTGATGCGGCATTGATGATGCGTCTTGGTGCAGATGGCGTTTTTGTCGGTTCAGGGATATTCAAAGCTGAAAACCCGGAAAAGATGGCTTCTGCTATCGTCGAGGCTGTGAATAATTATGATAATCCTTCCGTGCTTGCCGAGATTTCAAAGGGACTTGGCGGCGCCATGAAAGGTATTGATATCAGGAGCTTGACCGAGAAGGAAGTGCTTCAGGCGCGCGGCTGGTAG
PROTEIN sequence
Length: 299
MQLENLRHGTELIKRGFAKMQKGGVIMDVTTPEEALIAERAGAVAVMALHAVPADIRKAGGVARMADPQVIAAIIDSVTIPVMAKARIGHFVEAEILEALGVDMVDESEVLTPADESFHIDKTGFTIPFVCGARDLGEALRRMNEGAAMIRTKGEAGTGDVKEAVRHMRAIMGAIRELKGKSQEELIAVARKIEAPIELVKETAKLQRLPVVNFAAGGIATPADAALMMRLGADGVFVGSGIFKAENPEKMASAIVEAVNNYDNPSVLAEISKGLGGAMKGIDIRSLTEKEVLQARGW*