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SR-VP_26_10_2019_2_100cm_scaffold_1381

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_1381_1
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(2..970)
DNA (969bp) protein (323aa)
Radical SAM domain protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NY7_SOLUE
radical SAM domain-containing protein
Radical SAM domain protein {ECO:0000313|EMBL:ABJ88633.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatus (strain Ellin6076).;"
SR-VP_26_10_2019_2_100cm_scaffold_1381_2
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(942..3263)
DNA (2322bp) protein (774aa)
UPI0003D1C134 related cluster n=1 Tax=unknown RepID=UPI0003D1C134
Cbb3-type cytochrome oxidase, subunit 1
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_1381_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(3421..4317)
DNA (897bp) protein (299aa)
Pyridoxal 5'-phosphate synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824}; Short=PLP synthase subunit PdxS {ECO:0000256|HAMAP-Rule:MF_01824};; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01824};; Pdx1 {ECO:0000256|HAMAP-Rule:MF_01824}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Pyridoxal biosynthesis lyase PdxS n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5EB26_METMS
pyridoxal phosphate synthase yaaD subunit
SR-VP_26_10_2019_2_100cm_scaffold_1381_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4376..5020)
DNA (645bp) protein (215aa)
2-phospho-L-lactate guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114}; Short=LP guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_02114};; EC=2.7.7.68 {ECO:0000256|HAMAP-Rule:MF_02114};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
2-phospho-L-lactate guanylyltransferase n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RII0_METP4
2-phospho-L-lactate guanylyltransferase CofC
SR-VP_26_10_2019_2_100cm_scaffold_1381_5
unknown

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5391..5927
DNA (537bp) protein (179aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1381_6
unknown

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6016..6846
DNA (831bp) protein (277aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1381_7
unknown

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6830..7603
DNA (774bp) protein (258aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1381_8
unknown

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7883..8362
DNA (480bp) protein (160aa)
Transcriptional regulator, AsnC family n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNG9_METZD
AsnC family transcriptional regulator
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_9
unknown

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8313..9527
DNA (1215bp) protein (405aa)
Aminotransferase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7J4_METTP
aminotransferase, class I and II
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9575..10135)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8H2_METEZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ73591.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1381_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10304..10492)
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ73591.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1381_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10546..10815)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LL08_THEBM
TIGR00304 family protein {ECO:0000313|EMBL:KCZ72257.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1381_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(10808..11032)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E7Y3_METEZ
Putative membrane protein {ECO:0000313|EMBL:KCZ72256.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1381_14
unknown

Not on your lists

comp(11029..11586)
DNA (558bp) protein (186aa)
Uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXK4_METFV
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_15
unknown

Not on your lists

comp(11602..13191)
DNA (1590bp) protein (530aa)
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7E3_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_16
unknown

Not on your lists

13266..13424
DNA (159bp) protein (53aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_17
unknown

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comp(13421..14059)
DNA (639bp) protein (213aa)
Protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase 1 n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=PIMT1_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_18
unknown

Not on your lists

comp(14029..14700)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TT92_METAC
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_19
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14819..15166
DNA (348bp) protein (116aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ71970.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_1381_20
unknown

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comp(15470..15994)
DNA (525bp) protein (175aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
UPI0003D1A40F related cluster n=1 Tax=unknown RepID=UPI0003D1A40F
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_21
unknown

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comp(16501..16848)
DNA (348bp) protein (116aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_1381_22
Methanosarcina sp. WH1, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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16853..17440
DNA (588bp) protein (196aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB22150.1}; TaxID=1434102 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WH1.;"
ATPase id=4474491 bin=GWC2_OP3-like_45_7 species=Candidatus Korarchaeum cryptofilum genus=Candidatus Korarchaeum taxon_order=unknown taxon_class=unknown phylum=Korarchaeota tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_1381_23
unknown

Not on your lists

comp(17454..17729)
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MF30_9EURY
DNA-directed RNA polymerase, subunit M
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_24
unknown

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comp(17740..18177)
DNA (438bp) protein (146aa)
NUDIX hydrolase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MGZ0_9EURY
NUDIX hydrolase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_25
unknown

Not on your lists

comp(18204..19295)
DNA (1092bp) protein (364aa)
Small GTP-binding protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MEH5_9EURY
small GTP-binding protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_1381_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19358..20632
DNA (1275bp) protein (425aa)
Acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:KCZ70760.1}; EC=3.5.1.18 {ECO:0000313|EMBL:KCZ70760.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase n=1 Tax=uncultured archaeon GZfos10C7 RepID=Q64EN7_9ARCH
peptidase, ArgE/DapE family
SR-VP_26_10_2019_2_100cm_scaffold_1381_27
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

20653..21411
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDQ3_METFS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB02857.1}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP).;"
SR-VP_26_10_2019_2_100cm_scaffold_1381_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21473..22546)
DNA (1074bp) protein (358aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
phosphate ABC transporter ATP-binding protein, phot family (EC:3.6.3.27)
Phosphate-transporting ATPase id=4133758 bin=GWF2_Lentisphaerae_52_8 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_52_8 organism_group=Lentisphaerae
SR-VP_26_10_2019_2_100cm_scaffold_1381_29
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22547..23395)
DNA (849bp) protein (283aa)
Phosphate ABC transporter, permease protein PstA {ECO:0000313|EMBL:KCZ70281.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphate ABC transporter permease PstA id=8265777 bin=CD_OP8_4m species=Tannerella sp. CAG:51 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
phosphate ABC transporter, permease protein PstA
SR-VP_26_10_2019_2_100cm_scaffold_1381_30
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(23388..24308)
DNA (921bp) protein (307aa)
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:KCZ70280.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Phosphate ABC transporter, permease protein PstC id=8265776 bin=CD_OP8_4m species=Methanoregula formicica genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
phosphate ABC transporter, permease protein PstC
Displaying items 1-30 of 36 in total

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