ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_1381_20

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: comp(15470..15994)

Top 3 Functional Annotations

Value Algorithm Source
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33) similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 160.0
  • Bit_score: 255
  • Evalue 8.30e-66
UPI0003D1A40F related cluster n=1 Tax=unknown RepID=UPI0003D1A40F similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 159.0
  • Bit_score: 256
  • Evalue 1.70e-65
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 87.4
  • Coverage: 174.0
  • Bit_score: 318
  • Evalue 5.10e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Sequences

DNA sequence
Length: 525
ATGAAGCAGAAACTCACCGTCAACCTCGAAACCGACCTGAAACTCCCCGCAAACGTCTGGAAATTCGGGGATGACATAGACACCGATGCGATCATCCCTGGCAAATACCTCACCATCAATAAACCCGGGGAGCTTGCAAAACATGCTTTTGAGGGTGTGCGCCCTGAATTCGCAAGCGGGGTAAAGGATGGGGATATCATTGTGGCAGGTTTTAATTTCGGTTGCGGCTCATCGCGCGAACATGCGCCACTTGCGCTTCGGGGGGCGAAAGTCAAATGCATCATCGCAAAATCATTTGCCCGCATCTTTTTCAGGAATGCAATAAATATCGGACTTCCTCTTCTTGAGTGCCCTGATACTGATAAGATAGAGGAAGGAGACCACATAGAGGTCGATTTTGGGTCCGGGGTTATCACCAATACCACAAAAGGCGAGAGCTACCAGGCAACGCCGCTGCCCGACTTCGTGCGCGGCATAGTGGATGCCGGCGGGCTTATCGGATATGCACAAAAAATGGTGCAGTGA
PROTEIN sequence
Length: 175
MKQKLTVNLETDLKLPANVWKFGDDIDTDAIIPGKYLTINKPGELAKHAFEGVRPEFASGVKDGDIIVAGFNFGCGSSREHAPLALRGAKVKCIIAKSFARIFFRNAINIGLPLLECPDTDKIEEGDHIEVDFGSGVITNTTKGESYQATPLPDFVRGIVDAGGLIGYAQKMVQ*