ggKbase home page

SR-VP_26_10_2019_2_100cm_scaffold_2767_3

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: 1267..1965

Top 3 Functional Annotations

Value Algorithm Source
Lrp/AsnC family transcriptional regulator n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UD4_METBU similarity UNIREF
DB: UNIREF100
  • Identity: 61.4
  • Coverage: 223.0
  • Bit_score: 296
  • Evalue 2.00e-77
AsnC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 61.4
  • Coverage: 223.0
  • Bit_score: 296
  • Evalue 5.60e-78
Lrp/AsnC family transcriptional regulator {ECO:0000313|EMBL:ABE52942.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.4
  • Coverage: 223.0
  • Bit_score: 296
  • Evalue 2.80e-77

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Methanococcoides burtonii → Methanococcoides → Methanosarcinales → Methanomicrobia → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 699
ATGCAGTCTCTGACTAAAATGAGCAAAATAAATCCGGAAAGGATAGAGAAGATTGCGCATATAATTTCCGAAGTATCACGTATGGATGAAACCGATATGTTCATTCTGCTGACATTACTTGAAGACAGCAATATGACCAATGCGGAACTTGCAAAAATAATGAATTTTAAAGACGGGAATTCGGTAGCATATCACATACGAACAATGCAGCAGGAAGGAACAATAGAAAAATATTCGATAATTCCCAACTGGAAAAAAGTGGGATTACCAACAGAATTCATCCTTCTGGCAGAAGCCGAAAATGAAGAACAACTGCTTGAGATTGAAAAAAGCCATATAAAAATGGCAGATGAATATTCATCAAAATATGGAAAATTTGTAGTCACACAAACTATCTCAGGTTGTGTAATCCTGAAGGACATTTACCATTGTTTCGGCGACAAAACAATGGCAATAGTGATTGGCAGGGCAACTTCTGACCAGGATGCTGCTTTCTTTTGCAAGAATTATCTTGCCAGCAGATATCCCAATGTCAAAGTAAGTATGCTTATAAACAAGTACAATATAATTAGTGAGTTTTTCATAGATAAACCCGGATTAAGTAAATTGAAGGAAATCTTCCGGATAGGAAAAAAAGATGTTCCTGCTGCCGTAGTGAATGAATCGCAATCAATCAGTAAAGAAATACCGGCAATTTAA
PROTEIN sequence
Length: 233
MQSLTKMSKINPERIEKIAHIISEVSRMDETDMFILLTLLEDSNMTNAELAKIMNFKDGNSVAYHIRTMQQEGTIEKYSIIPNWKKVGLPTEFILLAEAENEEQLLEIEKSHIKMADEYSSKYGKFVVTQTISGCVILKDIYHCFGDKTMAIVIGRATSDQDAAFFCKNYLASRYPNVKVSMLINKYNIISEFFIDKPGLSKLKEIFRIGKKDVPAAVVNESQSISKEIPAI*