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SR-VP_26_10_2019_2_100cm_scaffold_2767

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_2767_1
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3..635)
DNA (633bp) protein (211aa)
Adenosylhomocysteinase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YY94_METPS
ahcY; adenosylhomocysteinase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2767_2
unknown

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1134..1283
DNA (150bp) protein (50aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2767_3
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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1267..1965
DNA (699bp) protein (233aa)
Lrp/AsnC family transcriptional regulator n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12UD4_METBU
AsnC family transcriptional regulator
Lrp/AsnC family transcriptional regulator {ECO:0000313|EMBL:ABE52942.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 /; ACE-M).;"
SR-VP_26_10_2019_2_100cm_scaffold_2767_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2587..4437
DNA (1851bp) protein (617aa)
IPT/TIG domain-containing protein {ECO:0000313|EMBL:KCZ73597.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Conserved repeat domain protein id=3872468 bin=GWF2_Lentisphaerae_49_21 species=Chitinophaga pinensis genus=Chitinophaga taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good +
peptidase-like protein
SR-VP_26_10_2019_2_100cm_scaffold_2767_5
Geobacter pickeringii, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4546..5952
DNA (1407bp) protein (469aa)
Cytochrome c n=2 Tax=Geobacter metallireducens RepID=Q39X52_GEOMG
cytochrome C
Cytochrome C {ECO:0000313|EMBL:AJE02864.1}; TaxID=345632 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter pickeringii.;"
SR-VP_26_10_2019_2_100cm_scaffold_2767_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5958..7817
DNA (1860bp) protein (620aa)
Subtilisin-like serine protease {ECO:0000313|EMBL:KCZ73596.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Peptidase S8 and S53 subtilisin kexin sedolisin id=2013835 bin=GWB2_Pelobacter_53_15 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Pelobacter_53_15 organism_group=Deltaproteobacteria organism_desc=Good
subtilase family serine protease
SR-VP_26_10_2019_2_100cm_scaffold_2767_7
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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7814..14671
DNA (6858bp) protein (2286aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S3K8_FERPA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_2767_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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14686..14952
DNA (267bp) protein (89aa)
Uncharacterized protein n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0B9V2_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2767_9
unknown

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14933..15070
DNA (138bp) protein (46aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_2767_trna_1
unknown

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comp(15407..15505)
DNA (99bp)
transferRNA Gly
SR-VP_26_10_2019_2_100cm_scaffold_2767_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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15670..17403
DNA (1734bp) protein (578aa)
potassium-transporting ATPase subunit A (EC:3.6.3.12)
Potassium-transporting ATPase A chain n=1 Tax=Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA) RepID=ATKA_GEOSL
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_2767_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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17405..17983
DNA (579bp) protein (193aa)
Potassium-transporting ATPase B chain n=2 Tax=Geobacter sulfurreducens RepID=D7AK74_GEOSK
kdpB; potassium-transporting ATPase, B subunit
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 12 items

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