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SR-VP_26_10_2019_2_100cm_scaffold_366_22

Organism: SR-VP_26_10_2019_2_100cm_Methanoperedens_43_60

partial RP 26 / 55 MC: 7 BSCG 21 / 51 MC: 2 ASCG 27 / 38 MC: 2
Location: 20066..20851

Top 3 Functional Annotations

Value Algorithm Source
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-) similarity KEGG
DB: KEGG
  • Identity: 68.8
  • Coverage: 256.0
  • Bit_score: 364
  • Evalue 1.90e-98
Exosome complex component Rrp42 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=RRP42_UNCMA similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 256.0
  • Bit_score: 364
  • Evalue 6.70e-98
Tax=RBG_16_Euryarchaeota_41_19_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 259.0
  • Bit_score: 474
  • Evalue 8.40e-131

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Taxonomy

RBG_16_Euryarchaeota_41_19_curated → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 786
ATGCCATTGAGTAATGAGGTAATGGCAGAACTTCGTAAAGATTATATCTATAATCTTATGATTAAAGGTGAGCGGGAAGATGGAAGGACTTTTGACCAGTACAGGGAAATCACGATAGATACCAATGTAATAGAGAAAGCGGAAGGGTCGGCACGCGTGAAACTCGGGGACACACATCTGGTAGTGGGTGTGAAAATCCAACCCGGCACGCCATTTCCCGATACACCCGACCAGGGAGTTATCATTACCAATCTTGAACTTATCCCGCTGGCTTCACCGGTATTTGAATCCGGTCCTCCGAGAGAGGATGCTATAGAACTTGCAAGGGTCGTGGACAGGGGCATCCGCGAATCAGGAGCTATTGACCTTTCCAAATTGTGCGTAACCCCTGGAGAGAAGGTATGGATGGTTTTCATTGATGTGCATGTGCTGGACGACGGCGGGAACATAATGGATGCTGCATCTCTCGGTGCGATTGCAGCCCTAATGACTGCGAAACTGCCGGCAAAACGTTTTGACCTCGGTGAGGATACGCCGGTACCAATAAGGGATGTGCCTGTTGCGGTCACGGCTGTCGAAGTAGGCGGTTCAATAATGTTTGACCCGTCGCTGAACGAACAAAGCATAGCGGGTACGAAGCTGACAGTCATATCCAACCAGGACGGATGCTTATCAGGTATGCAGAAGAGCGGTGTTCATCCGCTCACTACCGAACAGATAAATTATATAGTGGATAATGCAATTGAGAAGGCAAAAGAGCTAAGACAAAAATTCCTGGAGATATAA
PROTEIN sequence
Length: 262
MPLSNEVMAELRKDYIYNLMIKGEREDGRTFDQYREITIDTNVIEKAEGSARVKLGDTHLVVGVKIQPGTPFPDTPDQGVIITNLELIPLASPVFESGPPREDAIELARVVDRGIRESGAIDLSKLCVTPGEKVWMVFIDVHVLDDGGNIMDAASLGAIAALMTAKLPAKRFDLGEDTPVPIRDVPVAVTAVEVGGSIMFDPSLNEQSIAGTKLTVISNQDGCLSGMQKSGVHPLTTEQINYIVDNAIEKAKELRQKFLEI*