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SR-VP_26_10_2019_2_100cm_scaffold_366

Search features with annotation key words

Displaying items 1-30 of 70 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_100cm_scaffold_366_1
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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127..828
DNA (702bp) protein (234aa)
Uncharacterized protein MJ0888 n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YA11_9DELT
beta-lactamase domain-containing protein
Tax=RBG_16_Deltaproteobacteria_47_11_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

1258..3291
DNA (2034bp) protein (678aa)
CoB--CoM heterodisulfide reductase subunit A n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXF5_METFV
cob--com heterodisulfide reductase subunit a
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_3
unknown

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3823..4653
DNA (831bp) protein (277aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_366_4
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

4685..5491
DNA (807bp) protein (269aa)
hypothetical protein
Tax=RBG_16_Chloroflexi_68_14_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_trna_2
unknown

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comp(5864..5971)
DNA (108bp)
transferRNA Glu
SR-VP_26_10_2019_2_100cm_scaffold_366_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

6080..6790
DNA (711bp) protein (237aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_6
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(6787..7107)
DNA (321bp) protein (107aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

7195..7413
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72995.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_100cm_scaffold_366_8
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

7429..9723
DNA (2295bp) protein (765aa)
UPI0003D1A8D6 related cluster n=1 Tax=unknown RepID=UPI0003D1A8D6
helicase domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_9

Not on your lists

comp(9833..10561)
DNA (729bp) protein (243aa)
Marine sediment metagenome DNA, contig: S03H2_S02326 {ECO:0000313|EMBL:GAH60072.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
SR-VP_26_10_2019_2_100cm_scaffold_366_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

10768..11013
DNA (246bp) protein (82aa)
Hypothetical membrane protein n=1 Tax=uncultured archaeon RepID=D1J984_9ARCH
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_trna_1
unknown

Not on your lists

11064..11138
DNA (75bp)
transferRNA Pro
SR-VP_26_10_2019_2_100cm_scaffold_366_11
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11454..12812
DNA (1359bp) protein (453aa)
gdhA; glutamate dehydrogenase (EC:1.4.1.3)
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1434104 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens MM1.;"
Glutamate dehydrogenase id=4830576 bin=GWC2_Nitrospirae_57_13 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
SR-VP_26_10_2019_2_100cm_scaffold_366_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12807..13667)
DNA (861bp) protein (287aa)
speB; agmatinase (EC:3.5.3.11)
Agmatinase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I4U2_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists


comp(13668..14054)
DNA (387bp) protein (129aa)
Translation initiation factor 5A n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KTK6_METHD
translation initiation factor eIF-5A
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_14
unknown

Not on your lists

comp(14340..14987)
DNA (648bp) protein (216aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_366_15
unknown

Not on your lists

comp(15282..15392)
DNA (111bp) protein (37aa)

This feature has no annotations

SR-VP_26_10_2019_2_100cm_scaffold_366_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15709..16368
DNA (660bp) protein (220aa)
Ribonuclease P protein component 3 {ECO:0000256|HAMAP-Rule:MF_00756}; Short=RNase P component 3 {ECO:0000256|HAMAP-Rule:MF_00756};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00756};; Rpp30 {ECO:0000256|HAMAP-Rule:MF_00756}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ribonuclease P protein component 3 (EC:3.1.26.5)
Ribonuclease P protein component 3 n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=RNP3_METBU
SR-VP_26_10_2019_2_100cm_scaffold_366_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16473..16844
DNA (372bp) protein (124aa)
Ribonuclease P protein component 2 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8G8_METEZ
ribonuclease P
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

16976..17749
DNA (774bp) protein (258aa)
Proteasome subunit alpha, archaeal (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=PSA_METBF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists


17756..18451
DNA (696bp) protein (232aa)
Shwachman-Bodian-Diamond syndrome protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B8W5_METTP
putative RNA-associated protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

18457..19299
DNA (843bp) protein (281aa)
Exosome complex component Rrp4 n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B8W4_METTP
exosome complex RNA-binding protein Rrp4
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

19348..20079
DNA (732bp) protein (244aa)
rrp41p; putative exosome complex exonuclease 1 (EC:3.1.13.-)
Exosome complex component Rrp41 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W2Y8_UNCMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_22
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

20066..20851
DNA (786bp) protein (262aa)
rrp42p; exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-)
Exosome complex component Rrp42 n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=RRP42_UNCMA
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_23
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

20854..21159
DNA (306bp) protein (102aa)
50S ribosomal protein L37Ae n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8G3_METEZ
50S ribosomal protein L37a
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_100cm_scaffold_366_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21302..21730
DNA (429bp) protein (143aa)
Probable Brix domain-containing ribosomal biogenesis protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8G1_METEZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ70720.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Brix domain-containing protein
SR-VP_26_10_2019_2_100cm_scaffold_366_25
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21723..22688
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8N6_METEZ
Uncharacterized protein {ECO:0000313|EMBL:KCZ70719.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_100cm_scaffold_366_26
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

23118..24614
DNA (1497bp) protein (499aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_366_27
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

24626..25588
DNA (963bp) protein (321aa)
hypothetical protein n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B37C8E
modification methylase
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_26_10_2019_2_100cm_scaffold_366_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(25660..26307)
DNA (648bp) protein (216aa)
6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MJF6_9EURY
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying items 1-30 of 70 in total

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