ggKbase home page

SR-VP_26_10_2019_2_90cm_scaffold_11250

Search features with annotation key words

Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_90cm_scaffold_11250_1
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

1..339
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0F0_METHD
Uncharacterized protein {ECO:0000313|EMBL:KCZ70680.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_90cm_scaffold_11250_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

357..848
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5F8_METTP
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_90cm_scaffold_11250_3
unknown

Not on your lists

1141..1260
DNA (120bp) protein (40aa)

This feature has no annotations

SR-VP_26_10_2019_2_90cm_scaffold_11250_4
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

Not on your lists

1273..2877
DNA (1605bp) protein (535aa)
Putative uncharacterized protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LLB8_CHLTF
Kelch motif protein {ECO:0000313|EMBL:AEP13651.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Chloracidobacterium.;" source="Chloracidobacterium thermophilum (strain B).;"
Kelch motif protein
SR-VP_26_10_2019_2_90cm_scaffold_11250_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

2909..3988
DNA (1080bp) protein (360aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72158.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_90cm_scaffold_11250_6
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4045..4317)
DNA (273bp) protein (91aa)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1C250 related cluster n=1 Tax=unknown RepID=UPI0003D1C250
RNA polymerase dimerization
SR-VP_26_10_2019_2_90cm_scaffold_11250_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(4353..5111)
DNA (759bp) protein (253aa)
RNA-binding protein (Consists of S1 domain and a Zn-ribbon domain) n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E7V0_METMS
RNA-binding protein (consists of S1 domain and a Zn-ribbon domain)
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_90cm_scaffold_11250_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(5098..5688)
DNA (591bp) protein (197aa)
Putative RNA methylase {ECO:0000313|EMBL:KCZ70676.1}; EC=2.1.1.- {ECO:0000313|EMBL:KCZ70676.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Ribosomal L11 methyltransferase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E9E5_METEZ
ribosomal L11 methyltransferase
SR-VP_26_10_2019_2_90cm_scaffold_11250_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(5685..6335)
DNA (651bp) protein (217aa)
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 9 items

View Taxonomy