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SR-VP_26_10_2019_2_90cm_scaffold_4606

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2019_2_90cm_scaffold_4606_1
Haemophilus influenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1299)
DNA (1299bp) protein (433aa)
Putative trimeric autotransporter adhesin n=5 Tax=Haemophilus RepID=E7AGE2_HAEIF
baaA2; trimeric autotransporter adhesin
Putative trimeric autotransporter adhesin {ECO:0000313|EMBL:CBY80720.1}; TaxID=866630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus influenzae F3031.;"
SR-VP_26_10_2019_2_90cm_scaffold_4606_2
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(1654..2400)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E885_METEZ
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_90cm_scaffold_4606_3
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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2488..2919
DNA (432bp) protein (144aa)
Cytochrome c-type biogenesis protein CcmE {ECO:0000313|EMBL:KCZ72342.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
ccmE; cytochrome c-type biogenesis protein CcmE
SR-VP_26_10_2019_2_90cm_scaffold_4606_4
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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3123..4406
DNA (1284bp) protein (428aa)
Amino acid/polyamine/organocation transporter, APC superfamily n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WM06_METH6
Amino acid/polyamine/organocation transporter, APC superfamily
Amino acid/polyamine/organocation transporter, APC superfamily {ECO:0000313|EMBL:AET64381.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strain 6Ac).;"
SR-VP_26_10_2019_2_90cm_scaffold_4606_5
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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4579..7188
DNA (2610bp) protein (870aa)
DNA mismatch repair protein MutS n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MQK8_9EURY
DNA mismatch repair protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_90cm_scaffold_4606_6

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7185..7652
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037E63E3
Marine sediment metagenome DNA, contig: S06H3_L02939 {ECO:0000313|EMBL:GAI06763.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
SR-VP_26_10_2019_2_90cm_scaffold_4606_7
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(7687..8109)
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos26G2 RepID=Q64BQ6_9ARCH
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:KCZ73090.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_90cm_scaffold_4606_8
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8090..8326)
DNA (237bp) protein (79aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos26G2 RepID=Q64BP8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ73091.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
SR-VP_26_10_2019_2_90cm_scaffold_4606_9
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8431..8832)
DNA (402bp) protein (134aa)
Cytochrome C and Quinol oxidase polypeptide I {ECO:0000313|EMBL:KCZ70389.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Putative uncharacterized protein id=3846461 bin=GWC2_Nitrospirae_57_13 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
SR-VP_26_10_2019_2_90cm_scaffold_4606_10
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(8857..9075)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ70390.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2019_2_90cm_scaffold_4606_11
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9147..9665
DNA (519bp) protein (173aa)
UPI0003D1B6AC related cluster n=1 Tax=unknown RepID=UPI0003D1B6AC
Putative transcriptional regulator with an HTH domain {ECO:0000313|EMBL:KCZ73072.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
putative transcriptional regulator with an HTH domain
SR-VP_26_10_2019_2_90cm_scaffold_4606_12
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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9758..11068
DNA (1311bp) protein (437aa)
glutamate-1-semialdehyde-2,1-aminomutase (EC:5.4.3.8)
UPI0003D1BB3D related cluster n=1 Tax=unknown RepID=UPI0003D1BB3D
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2019_2_90cm_scaffold_4606_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11065..11868
DNA (804bp) protein (268aa)
Probable porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAMAP-Rule:MF_00260}; Pre-uroporphyrinogen synthase {ECO:0000256|HAMAP-Rule:MF_00260}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
porphobilinogen deaminase (EC:2.5.1.61)
Probable porphobilinogen deaminase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYK1_METHD
SR-VP_26_10_2019_2_90cm_scaffold_4606_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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11961..12701
DNA (741bp) protein (247aa)
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:KCZ72557.1}; EC=2.1.1.107 {ECO:0000313|EMBL:KCZ72557.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uroporphyrin-III C-methyltransferase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KX65_METHD
uroporphyrin-III C-methyltransferase
SR-VP_26_10_2019_2_90cm_scaffold_4606_15
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12778..13515
DNA (738bp) protein (246aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KCZ72558.1}; EC=4.2.1.75 {ECO:0000313|EMBL:KCZ72558.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Uroporphyrinogen III synthase HEM4 n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6K9_METEZ
uroporphyrinogen III synthase HEM4
Displaying 15 items

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