ggKbase home page

SR-VP_0-2_scaffold_141_3299609

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_3299609_1
unknown

Not on your lists


comp(3..1355)
DNA (1353bp) protein (451aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12W38_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3299609_trna_1
unknown

Not on your lists

1454..1527
DNA (74bp)
transferRNA Val
SR-VP_0-2_scaffold_141_3299609_2
unknown

Not on your lists

comp(1602..1859)
DNA (258bp) protein (86aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_3299609_3
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1916..2974)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JFZ0_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ14661.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
yrrB_[H]; TPR repeat protein
SR-VP_0-2_scaffold_141_3299609_4
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2971..6321)
DNA (3351bp) protein (1117aa)
Uncharacterized protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JQS2_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ESQ14660.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="uncultured Thiohalocapsa sp. PB-PSB1.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3299609_5
Microcystis aeruginosa, Microcystis, Chroococcales, Cyanobacteria, Bacteria

Not on your lists

comp(6443..7093)
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI0002F0BBE6
Uncharacterized protein {ECO:0000313|EMBL:CCI03971.1}; TaxID=1160281 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa PCC 9443.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3299609_6
GWC2_Nitrospirae_57_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(7090..8343)
DNA (1254bp) protein (418aa)
hypothetical protein n=1 Tax=Burkholderia sp. JPY251 RepID=UPI0003778698
putative membrane protein
Tax=GWC2_Nitrospirae_57_9_curated
SR-VP_0-2_scaffold_141_3299609_7

Not on your lists

comp(8393..10231)
DNA (1839bp) protein (613aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAN2_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39162.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3299609_8

Not on your lists

comp(10252..12426)
DNA (2175bp) protein (725aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAN1_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39161.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
phage tail protein
SR-VP_0-2_scaffold_141_3299609_9
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12423..14663)
DNA (2241bp) protein (747aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAN0_9ARCH
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
SR-VP_0-2_scaffold_141_3299609_10
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14665..19893)
DNA (5229bp) protein (1743aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2G241_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGW36025.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3299609_11

Not on your lists

comp(19897..20292)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAM8_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39158.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
phage baseplate outer wedge protein (acidic lysozyme)
SR-VP_0-2_scaffold_141_3299609_12

Not on your lists

comp(20305..20610)
DNA (306bp) protein (102aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAM7_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39157.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3299609_13
Desulfosporosinus sp. OT, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20624..21280)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2G244_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGW36028.1}; TaxID=913865 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. OT.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3299609_14
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(21277..22374)
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=1 Tax=Paenibacillus curdlanolyticus YK9 RepID=E0I820_9BACL
VgrG protein {ECO:0000313|EMBL:AKB18668.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3299609_15
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(22381..23031)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAM4_9ARCH
LysM domain/BON superfamily protein {ECO:0000313|EMBL:AKB18667.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3299609_16
unknown

Not on your lists

comp(23022..24704)
DNA (1683bp) protein (561aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_3299609_17
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24697..25146)
DNA (450bp) protein (150aa)
Conserved hypothetical phage tail region protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYS1_METHD
conserved hypothetical phage tail region protein
Conserved hypothetical phage tail region protein {ECO:0000313|EMBL:AGB49815.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_0-2_scaffold_141_3299609_18
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25242..25424)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXJ2_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49816.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_0-2_scaffold_141_3299609_19
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25421..25786)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Geobacter sulfurreducens RepID=D7AHB5_GEOSK
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
SR-VP_0-2_scaffold_141_3299609_20
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25796..26239)
DNA (444bp) protein (148aa)
Conserved hypothetical phage tail region protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0D4_METHD
conserved hypothetical phage tail region protein
Conserved hypothetical phage tail region protein {ECO:0000313|EMBL:AGB49818.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_0-2_scaffold_141_3299609_21
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(26292..27869)
DNA (1578bp) protein (526aa)
Phage tail sheath protein FI n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0Q7_METHD
phage tail sheath protein FI
Phage tail sheath protein FI {ECO:0000313|EMBL:AGB49819.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_0-2_scaffold_141_3299609_22
Methanosarcina sp. WWM596, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(27993..28814)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYS6_METHD
Uncharacterized protein {ECO:0000313|EMBL:AKB18660.1}; TaxID=1434103 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina sp. WWM596.;"
hypothetical protein
SR-VP_0-2_scaffold_141_3299609_23
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(28816..29421)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KXJ6_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB49821.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_0-2_scaffold_141_3299609_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(29519..31666)
DNA (2148bp) protein (716aa)
AAA+ family ATPase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KWL7_METHD
AAA+ family ATPase {ECO:0000313|EMBL:KCZ70560.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
AAA+ family ATPase
SR-VP_0-2_scaffold_141_3299609_25
unknown

Not on your lists

comp(32569..33627)
DNA (1059bp) protein (353aa)
FO synthase subunit 2 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XM51_METZD
7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3299609_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(33690..34682)
DNA (993bp) protein (331aa)
FO synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; EC=2.5.1.77 {ECO:0000256|HAMAP-Rule:MF_01611};; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1 {ECO:0000256|HAMAP-Rule:MF_01611}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
FO synthase subunit 1 n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=UPI0000069145
cofG; FO synthase subunit 1
SR-VP_0-2_scaffold_141_3299609_trna_2
unknown

Not on your lists

34770..34852
DNA (83bp)
transferRNA Leu
SR-VP_0-2_scaffold_141_3299609_27
unknown

Not on your lists

34927..36435
DNA (1509bp) protein (503aa)
seryl-tRNA synthetase (EC:6.1.1.11)
Type-2 serine--tRNA ligase n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E729_METMS
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_3299609_28
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(36744..37007)
DNA (264bp) protein (88aa)
Uncharacterized protein n=2 Tax=Cyanothece RepID=B1WWY8_CYAA5
Uncharacterized protein {ECO:0000313|EMBL:KCZ70509.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
hypothetical protein
Displaying items 1-30 of 38 in total

View Taxonomy