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SR-VP_0-2_scaffold_141_8337486

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_0-2_scaffold_141_8337486_1
unknown

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1..2070
DNA (2070bp) protein (690aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
UPI0003D1AA03 related cluster n=1 Tax=unknown RepID=UPI0003D1AA03
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_8337486_2
unknown

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comp(2100..2657)
DNA (558bp) protein (186aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_8337486_3
unknown

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2796..4997
DNA (2202bp) protein (734aa)
UPI0003D1BDA8 related cluster n=1 Tax=unknown RepID=UPI0003D1BDA8
DEAD/DEAH box helicase domain-containing protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_8337486_4
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5039..5983
DNA (945bp) protein (315aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; Undecaprenyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01139}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1A9BE related cluster n=1 Tax=unknown RepID=UPI0003D1A9BE
undecaprenyl diphosphate synthase
SR-VP_0-2_scaffold_141_8337486_5
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(5986..6639)
DNA (654bp) protein (218aa)
Undecaprenyl pyrophosphate synthase {ECO:0000313|EMBL:KCZ70562.1}; EC=2.5.1.31 {ECO:0000313|EMBL:KCZ70562.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
UPI0003D1A67A related cluster n=1 Tax=unknown RepID=UPI0003D1A67A
undecaprenyl pyrophosphate synthetase
SR-VP_0-2_scaffold_141_8337486_6
unknown

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6697..8052
DNA (1356bp) protein (452aa)
TIGR00297 family protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KYM7_METHD
TIGR00297 family protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_8337486_7

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8261..9283
DNA (1023bp) protein (341aa)
Hypothetical secreted protein, periplasmic copper-binding protein family n=1 Tax=uncultured archaeon RepID=D1J9C7_9ARCH
Hypothetical secreted protein, periplasmic copper-binding protein family {ECO:0000313|EMBL:CBH38707.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
endonuclease/exonuclease/phosphatase
SR-VP_0-2_scaffold_141_8337486_8
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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9657..10607
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4C5_UNCMA
hypothetical protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
SR-VP_0-2_scaffold_141_8337486_trna_1
unknown

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9709..9782
DNA (74bp)
transferRNA Arg
SR-VP_0-2_scaffold_141_8337486_9
unknown

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comp(10746..11045)
DNA (300bp) protein (100aa)
Nucleoid protein MC1 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MDV3_9EURY
nucleoid protein MC1
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_8337486_10
unknown

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comp(11120..11269)
DNA (150bp) protein (50aa)

This feature has no annotations

SR-VP_0-2_scaffold_141_8337486_11
unknown

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11362..12771
DNA (1410bp) protein (470aa)
L-threonine 3-O-phosphate decarboxylase (EC:4.1.1.81)
Aminotransferase class I and II n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XNP5_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_8337486_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12768..13691
DNA (924bp) protein (308aa)
Probable cobalamin biosynthesis protein CobD n=2 Tax=Methanosarcina mazei RepID=M1QKH6_METMZ
Probable cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
CbiB protein
SR-VP_0-2_scaffold_141_8337486_13
unknown

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13712..14320
DNA (609bp) protein (203aa)
UPI0003D1C28C related cluster n=1 Tax=unknown RepID=UPI0003D1C28C
hypothetical protein
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_0-2_scaffold_141_8337486_14
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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14317..15027
DNA (711bp) protein (237aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719};; Cobalamin synthase {ECO:0000256|HAMAP-Rule:MF_00719}; Cobalamin-5'-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00719}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
Cobalamin synthase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E6A8_METEZ
cobalamin 5'-phosphate synthase
Displaying 15 items

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