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SR-VP_26_10_2020_1_100CM_scaffold_942502

Search features with annotation key words

Displaying 28 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SR-VP_26_10_2020_1_100CM_scaffold_942502_1
Aromatoleum aromaticum, Aromatoleum, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..920)
DNA (918bp) protein (306aa)
acyl-CoA synthetase
Putative acyl-CoA synthetase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5P289_AROAE
Putative acyl-CoA synthetase {ECO:0000313|EMBL:CAI08575.1}; TaxID=76114 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Aromatoleum.;" source="Aromatoleum aromaticum (strain EbN1) (Azoarcus sp. (strain EbN1)).;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_2
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1309..1626
DNA (318bp) protein (106aa)
hypothetical protein
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3ILJ6_9PLAN
Uncharacterized protein {ECO:0000313|EMBL:KHJ36825.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_3
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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1632..3461
DNA (1830bp) protein (610aa)
abortive phage infection protein
Abortive phage infection protein n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KYN3_HALH1
AIPR protein {ECO:0000313|EMBL:KHJ36826.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_4
unknown

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3483..4046
DNA (564bp) protein (188aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_942502_5
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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4366..4914
DNA (549bp) protein (183aa)
putative DNA glycosylase (EC:3.2.2.-)
Putative DNA glycosylase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W1Z4_UNCMA
Putative DNA glycosylase {ECO:0000313|EMBL:CAJ37599.1}; EC=3.2.2.- {ECO:0000313|EMBL:CAJ37599.1};; TaxID=351160 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella arvoryzae (strain DSM 22066 / NBRC 105507 / MRE50).;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_6
unknown

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comp(4924..5070)
DNA (147bp) protein (49aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_942502_7
unknown

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comp(5166..5333)
DNA (168bp) protein (56aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_942502_8
unknown

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5560..5742
DNA (183bp) protein (61aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_942502_9
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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6026..7312
DNA (1287bp) protein (429aa)
putative ATPase
Putative ATPase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0KSM8_METHD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(7323..8408)
DNA (1086bp) protein (362aa)
peptidase M50
Peptidase M50 n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XP82_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(8482..9480)
DNA (999bp) protein (333aa)
ruvB; Holliday junction DNA helicase RuvB (EC:3.1.22.4)
Holliday junction ATP-dependent DNA helicase RuvB n=1 Tax=Methanoculleus bourgensis (strain ATCC 43281 / DSM 3045 / OCM 15 / MS2) RepID=I7KDL5_METBM
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_12
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(9500..10186)
DNA (687bp) protein (229aa)
CoA-substrate-specific enzyme activase
CoA-substrate-specific enzyme activase n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S717_METSF
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:KCZ70675.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_13
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(10183..11124)
DNA (942bp) protein (314aa)
2-hydroxyglutaryl-CoA dehydratase D-component
2-hydroxyglutaryl-CoA dehydratase D-component n=1 Tax=Methanocaldococcus sp. (strain FS406-22) RepID=D3S716_METSF
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_14
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(11365..11568)
DNA (204bp) protein (68aa)
hypothetical protein
UPI0003D1B8E3 related cluster n=1 Tax=unknown RepID=UPI0003D1B8E3
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_15
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(11596..11853)
DNA (258bp) protein (86aa)
translation initiation factor IF-2 subunit beta
Uncharacterized protein n=3 Tax=Methanosarcina RepID=Q8TUK8_METAC
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_16
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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12105..12890
DNA (786bp) protein (262aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L1Q6_METHD
Uncharacterized protein {ECO:0000313|EMBL:AGB50313.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;" source="Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 /; DMS1).;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_17
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(12980..14164)
DNA (1185bp) protein (395aa)
metal dependent phosphohydrolase
Metal dependent phosphohydrolase n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XMD5_METZD
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_18
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

14215..14655
DNA (441bp) protein (147aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RHV9_METP4
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_19
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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14657..15778
DNA (1122bp) protein (374aa)
hypothetical protein
SPFH domain, Band 7 family protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I8Q4_METCZ
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15775..16218
DNA (444bp) protein (148aa)
acetyltransferase, N-acetylglutamate synthase
Acetyltransferase, N-acetylglutamate synthase n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L275_METHD
Acetyltransferase, N-acetylglutamate synthase {ECO:0000313|EMBL:KCZ72375.1}; EC=2.3.1.1 {ECO:0000313|EMBL:KCZ72375.1};; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_21
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(16433..18445)
DNA (2013bp) protein (671aa)
metG; methionyl-tRNA synthetase (EC:6.1.1.10)
UPI0003D1BF9C related cluster n=1 Tax=unknown RepID=UPI0003D1BF9C
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_22
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

18632..18832
DNA (201bp) protein (67aa)
Uncharacterized protein {ECO:0000313|EMBL:KCZ72072.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_23
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19121..19558
DNA (438bp) protein (146aa)
hypothetical protein
UPF0216 protein BSM_17710 n=1 Tax=uncultured archaeon RepID=D1JID6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KCZ72461.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_24
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19661..21433
DNA (1773bp) protein (591aa)
Radical SAM N-terminal domain-containing protein
UPF0313 protein MCON_1402 n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BSW2_METCG
UPF0313 protein ANME2D_00989 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_25
unknown

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21522..21707
DNA (186bp) protein (62aa)

This feature has no annotations

SR-VP_26_10_2020_1_100CM_scaffold_942502_26
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

21807..22145
DNA (339bp) protein (113aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW60_METFV
Uncharacterized protein {ECO:0000313|EMBL:KCZ70990.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
SR-VP_26_10_2020_1_100CM_scaffold_942502_27
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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22381..23739
DNA (1359bp) protein (453aa)
isopropylmalate/citramalate/homocitrate synthase
Probable 2-isopropylmalate synthase 2 n=1 Tax=uncultured archaeon RepID=Q2Y4F2_9ARCH
Tax=RBG_16_Euryarchaeota_41_19_curated
SR-VP_26_10_2020_1_100CM_scaffold_942502_28
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(23716..24582)
DNA (867bp) protein (289aa)
phosphoesterase, RecJ-like protein
RecJ-like protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12ZB0_METBU
Tax=RBG_16_Euryarchaeota_41_19_curated
Displaying 28 items

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