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MPF_scaffold_234

Alias: MPF_Thermotoga_46_60_7

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_234_1
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(3..731)
DNA (729bp) protein (243aa)
Ornithine carbamoyltransferase, catabolic {ECO:0000256|HAMAP-Rule:MF_01109}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109};; TaxID=126740 species="Bacte
ornithine carbamoyltransferase
Ornithine carbamoyltransferase
MPF_scaffold_234_2
Thermotoga sp. Cell2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(735..1928)
DNA (1194bp) protein (398aa)
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase
MPF_scaffold_234_3
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(1934..3202)
DNA (1269bp) protein (423aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase rbh
Adenylosuccinate lyase
MPF_scaffold_234_4
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(3644..4963)
DNA (1320bp) protein (440aa)
RNA methyltransferase, TrmA family rbh
RNA methyltransferase, TrmA family {ECO:0000313|EMBL:ADA67741.1}; TaxID=590168 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga naphthophila (strain ATCC
Uncharacterized RNA methyltransferase TM_1094
MPF_scaffold_234_5
Thermotoga sp. Cell2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


comp(4967..6607)
DNA (1641bp) protein (547aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1157947 species="Bacteria; The
argS; arginyl-tRNA synthetase (EC:6.1.1.19) rbh
Arginine--tRNA ligase
MPF_scaffold_234_6
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(6645..7475)
DNA (831bp) protein (277aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADA67743.1}; TaxID=590168 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga naphthophila (strain ATCC BAA-489 /
Uncharacterized protein
MPF_scaffold_234_7
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(7468..7989)
DNA (522bp) protein (174aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADA67744.1}; TaxID=590168 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga naphthophila (strain ATCC BAA-489 /
Uncharacterized protein
MPF_scaffold_234_8
Thermotoga sp. Cell2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


comp(8017..9279)
DNA (1263bp) protein (421aa)
histidyl-tRNA synthetase (EC:6.1.1.21) rbh
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
Histidine--tRNA ligase
MPF_scaffold_234_9
Thermotoga maritima, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(9276..10775)
DNA (1500bp) protein (500aa)
TRK system potassium uptake protein TrkH rbh
Potassium uptake protein TrkH {ECO:0000313|EMBL:AGL50018.1}; TaxID=243274 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga maritima (strain ATCC 43589 /
Potassium uptake protein, TrkH family
MPF_scaffold_234_10
Thermotoga maritima, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(10782..11438)
DNA (657bp) protein (219aa)
potassium transporter TrkA rbh
Trk system potassium uptake protein TrkA {ECO:0000313|EMBL:AGL50017.1}; TrkA K+ Channel protien TM1088B {ECO:0000313|PDB:3L4B}; TaxID=243274 species="Bacteria; Thermotogae; Thermotogales; Thermotogace
TrkA K+ Channel protien TM1088B
MPF_scaffold_234_11
Thermotoga sp. Mc24, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(11435..11866)
DNA (432bp) protein (144aa)
TrkA domain-containing protein
TrkA domain-containing protein {ECO:0000313|EMBL:KHC91607.1}; TaxID=1231241 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. Mc24.;"
TrkA K+ Channel protien TM1088A
MPF_scaffold_234_12
Thermotoga sp. RQ2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(11886..12554)
DNA (669bp) protein (223aa)
rhomboid family protein rbh
Rhomboid family protein {ECO:0000313|EMBL:ACB10063.1}; TaxID=126740 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. (strain RQ2).;"
Rhomboid family protein
MPF_scaffold_234_13
Thermotoga sp. Mc24, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

comp(12559..13407)
DNA (849bp) protein (283aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KHC91609.1}; TaxID=1231241 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. Mc24.;"
Uncharacterized protein
MPF_scaffold_234_14
Thermotoga petrophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


13468..15357
DNA (1890bp) protein (630aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
methionyl-tRNA synthetase rbh
Methionine--tRNA ligase
MPF_scaffold_234_15
Thermotoga sp. Cell2, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists


15371..17785
DNA (2415bp) protein (805aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=1157947 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" sourc
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A
MPF_scaffold_234_16
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

17782..18156
DNA (375bp) protein (125aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADA67753.1}; TaxID=590168 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga naphthophila (strain ATCC BAA-489 /
Protein archease
MPF_scaffold_234_17
Thermotoga naphthophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

18153..18746
DNA (594bp) protein (198aa)
transcriptional repressor, LexA family (EC:3.4.21.88)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=590168 species="Bacteria; Thermot
LexA repressor
MPF_scaffold_234_18
Thermotoga sp. Mc24, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

18758..18856
DNA (99bp) protein (33aa)
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1231241 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. Mc24.;"
Putative anti-sigma factor antagonist TM_1081
MPF_scaffold_234_19
Thermotoga sp. Mc24, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

18864..19100
DNA (237bp) protein (79aa)
anti-sigma-factor antagonist
Anti-sigma factor antagonist {ECO:0000256|RuleBase:RU003749}; TaxID=1231241 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source="Thermotoga sp. Mc24.;"
Putative anti-sigma factor antagonist TM_1081
MPF_scaffold_234_20
Thermotoga petrophila, Thermotoga, Thermotogales, Thermotogae, Thermotogae, Bacteria

Not on your lists

19097..19528
DNA (432bp) protein (144aa)
ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose-5-phosphate isomerase {ECO:0000313|EMBL:ABQ47669.1}; EC=5.3.1.6 {ECO:0000313|EMBL:ABQ47669.1};; TaxID=390874 species="Bacteria; Thermotogae; Thermotogales; Thermotogaceae; Thermotoga.;" source=
Ribose-5-phosphate isomerase
Displaying 20 items

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