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MPF_scaffold_540

Alias: MPF_Thermococcus_litoralis_44_654_partial_7

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_540_1
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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1..972
-----------------
DNA (972bp)
protein (324aa)
sodium:proton antiporter
Sodium:proton antiporter {ECO:0000313|EMBL:AGT34207.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (stra
NapA-type sodium/hydrogen antiporter
MPF_scaffold_540_2
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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974..2098
-----------------
DNA (1125bp)
protein (375aa)
sodium:proton antiporter
Sodium:proton antiporter {ECO:0000313|EMBL:EHR79227.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (stra
NapA-type sodium/hydrogen antiporter
MPF_scaffold_540_3
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

2124..2465
-----------------
DNA (342bp)
protein (114aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHR79226.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strai
Uncharacterized protein
MPF_scaffold_540_4
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(2582..3007)
-----------------
DNA (426bp)
protein (142aa)
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:EHR79225.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (str
HTH-type transcriptional regulator Ptr2
MPF_scaffold_540_5
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(3061..4320)
-----------------
DNA (1260bp)
protein (420aa)
SAM-dependent methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:EHR79224.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litorali
tRNA (Uracil54-C5-)-methyltransferase
MPF_scaffold_540_6
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

4459..4671
-----------------
DNA (213bp)
protein (71aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHR79223.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (strai
Uncharacterized protein
MPF_scaffold_540_7
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(4668..5234)
-----------------
DNA (567bp)
protein (189aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
orotate phosphoribosyltransferase rbh
Orotate phosphoribosyltransferase
MPF_scaffold_540_8
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

5313..6233
-----------------
DNA (921bp)
protein (307aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=523849 species="Arc
aspartate carbamoyltransferase rbh
Aspartate carbamoyltransferase
MPF_scaffold_540_9
Thermococcus sibiricus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

6230..6682
-----------------
DNA (453bp)
protein (151aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Aspartate carbamoyltransferase regulatory chain {ECO:0000255|HAMAP-Rule:MF_00002}; TaxID=604354 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="T
Aspartate carbamoyltransferase regulatory chain
MPF_scaffold_540_10
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

6682..7947
-----------------
DNA (1266bp)
protein (422aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=523849 species="Archaea; Euryarchaeota; Thermoco
dihydroorotase
Dihydroorotase, multifunctional complex type
MPF_scaffold_540_11
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

7944..8645
-----------------
DNA (702bp)
protein (234aa)
dihydroorotate dehydrogenase
Dihydroorotate dehydrogenase {ECO:0000313|EMBL:EHR79218.1}; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus litoralis (
Dihydroorotate dehydrogenase electron transfer subunit
MPF_scaffold_540_12
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

8630..9550
-----------------
DNA (921bp)
protein (307aa)
dihydroorotate dehydrogenase
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
Dihydroorotate dehydrogenase
MPF_scaffold_540_13
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

9550..10299
-----------------
DNA (750bp)
protein (250aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|RuleBase:RU000512};; TaxID=523849 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococ
orotidine 5-phosphate decarboxylase rbh
Orotidine 5'-phosphate decarboxylase
MPF_scaffold_540_14
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(10296..10994)
-----------------
DNA (699bp)
protein (233aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01
phosphoglycolate phosphatase
Phosphoglycolate phosphatase
MPF_scaffold_540_15
Thermococcus litoralis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(11005..11355)
-----------------
DNA (351bp)
protein (117aa)
Probable tRNA pseudouridine synthase D {ECO:0000256|HAMAP-Rule:MF_01082}; EC=5.4.99.27 {ECO:0000256|HAMAP-Rule:MF_01082};; tRNA pseudouridine(13) synthase {ECO:0000256|HAMAP-Rule:MF_01082}; tRNA pseud
tRNA pseudouridine synthase D
Probable tRNA pseudouridine synthase D
Displaying 15 items

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