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MPF_scaffold_5

Alias: MPF_Firmicutes_38_45_1

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Displaying items 91-120 of 128 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_5_91
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(79898..80083)
DNA (186bp) protein (62aa)
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldan
50S ribosomal protein L32
50S ribosomal protein L32
MPF_scaffold_5_92
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(80102..80587)
DNA (486bp) protein (162aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC29545.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
hypothetical protein
Uncharacterized protein
MPF_scaffold_5_93
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(80656..81861)
DNA (1206bp) protein (402aa)
Acetate kinase {ECO:0000255|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000255|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000255|HAMAP-Rule:MF_00020}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia;
ackA; acetate kinase rbh
Acetate kinase
MPF_scaffold_5_94
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(81880..82875)
DNA (996bp) protein (332aa)
eutD; phosphotransacetylase rbh
Phosphotransacetylase {ECO:0000313|EMBL:AAM24701.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobact
Phosphotransacetylase
MPF_scaffold_5_95
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

82998..84203
DNA (1206bp) protein (402aa)
UPF0348 protein CDSM653_01399 {ECO:0000256|HAMAP-Rule:MF_01539}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Ca
hypothetical protein rbh
UPF0348 protein TTE1483
MPF_scaffold_5_96
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

84251..85411
DNA (1161bp) protein (387aa)
hypothetical protein rbh
Sporulation integral membrane protein YlbJ {ECO:0000313|EMBL:ERM92406.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;"
Sporulation integral membrane protein YlbJ
MPF_scaffold_5_97
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85413..85877)
DNA (465bp) protein (155aa)
NtpF; vacuolar-type H+-ATPase subunit H
Vacuolar-type H+-ATPase subunit H {ECO:0000313|EMBL:KKC29551.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Ca
Archaeal/vacuolar-type H+-ATPase subunit H
MPF_scaffold_5_98
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(85892..86374)
DNA (483bp) protein (161aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyr
coaD; phosphopantetheine adenylyltransferase rbh
Phosphopantetheine adenylyltransferase
MPF_scaffold_5_99
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(86371..86925)
DNA (555bp) protein (185aa)
N-6 DNA methylase {ECO:0000313|EMBL:ERM92403.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter
N-6 adenine-specific DNA methylase rbh
N6-adenine-specific methylase
MPF_scaffold_5_100
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87136..87363)
DNA (228bp) protein (76aa)
Small, acid-soluble spore protein, alpha/be {ECO:0000313|EMBL:KKC29554.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;"
small, acid-soluble spore proteins, alpha/be
Small acid-soluble spore protein, alpha/beta type
MPF_scaffold_5_101
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87500..87727)
DNA (228bp) protein (76aa)
small, acid-soluble spore proteins, alpha/be
SspA {ECO:0000313|EMBL:ERM92401.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus
Small, acid-soluble spore proteins, alpha/be
MPF_scaffold_5_102
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87843..88685)
DNA (843bp) protein (281aa)
DegV; hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC29556.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
DegV domain-containing protein TTE1491
MPF_scaffold_5_103
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(88706..90754)
DNA (2049bp) protein (683aa)
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:EEB75325.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cald
RecG; ATP-dependent DNA helicase RecG rbh
RecG-like helicase
MPF_scaffold_5_104
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(90768..92345)
DNA (1578bp) protein (526aa)
kinase related to dihydroxyacetone kinase rbh
Predicted kinase related to dihydroxyacetone kinase {ECO:0000313|EMBL:AAM24711.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaeroba
Predicted kinase related to dihydroxyacetone kinase
MPF_scaffold_5_105
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(92359..92709)
DNA (351bp) protein (117aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24712.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_5_106
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


92861..93049
DNA (189bp) protein (63aa)
rpmB; 50S ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldan
50S ribosomal protein L28
MPF_scaffold_5_107
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(93327..93962)
DNA (636bp) protein (212aa)
Thiamine pyrophosphokinase {ECO:0000313|EMBL:KKC29563.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaer
Thi80; thiamine pyrophosphokinase rbh
Thiamine pyrophosphokinase
MPF_scaffold_5_108
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(93959..94609)
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanae
Rpe2; Pentose-5-phosphate-3-epimerase rbh
Ribulose-phosphate 3-epimerase
MPF_scaffold_5_109
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94606..95493)
DNA (888bp) protein (296aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000255|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000255|HAMAP-Rule:MF_01820};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterale
GTPase rbh
Putative ribosome biogenesis GTPase RsgA
MPF_scaffold_5_110
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(95494..97371)
DNA (1878bp) protein (626aa)
Sps1; Serine/threonine protein kinase rbh
Protein tyrosine kinase family {ECO:0000313|EMBL:EEB75257.1}; Serine/threonine protein kinase {ECO:0000313|EMBL:KKC29567.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobactera
Probable serine/threonine-protein kinase Sps1
MPF_scaffold_5_111
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(97368..98111)
DNA (744bp) protein (248aa)
Ptc1; Ser/Thr phosphatase rbh
Protein serine/threonine phosphatases {ECO:0000313|EMBL:AAM24719.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source
Protein serine/threonine phosphatases
MPF_scaffold_5_112
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98118..99146)
DNA (1029bp) protein (343aa)
Probable dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HA
ribosomal RNA large subunit methyltransferase N rbh
Probable dual-specificity RNA methyltransferase RlmN
MPF_scaffold_5_113
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(99164..100495)
DNA (1332bp) protein (444aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacter
Sun; tRNA and rRNA cytosine-C5-methylase rbh
tRNA and rRNA cytosine-C5-methylases
MPF_scaffold_5_114
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(100514..101197)
DNA (684bp) protein (228aa)
Zn-dependent protease rbh
Predicted Zn-dependent protease {ECO:0000313|EMBL:AAM24722.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cald
Predicted Zn-dependent protease
MPF_scaffold_5_115
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101202..101954)
DNA (753bp) protein (251aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM24723.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_5_116
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101973..102887)
DNA (915bp) protein (305aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=391606 species="B
Fmt; methionyl-tRNA formyltransferase rbh
Methionyl-tRNA formyltransferase
MPF_scaffold_5_117
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(102907..103386)
DNA (480bp) protein (160aa)
def; peptide deformylase (EC:3.5.1.88) rbh
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
Peptide deformylase
MPF_scaffold_5_118
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(103411..105609)
DNA (2199bp) protein (733aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=273068 species="Bacteria; F
PriA; primosomal protein N rbh
Primosomal protein N (Replication factor Y)-superfamily II helicase
MPF_scaffold_5_119
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(105662..106858)
DNA (1197bp) protein (399aa)
Dfp; phosphopantothenoylcysteine synthetase/decarboxylase rbh
Phosphopantothenoylcysteine synthetase/decarboxylase {ECO:0000313|EMBL:AAM24727.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerob
Phosphopantothenoylcysteine synthetase/decarboxylase
MPF_scaffold_5_120
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(106869..107081)
DNA (213bp) protein (71aa)
rpoZ; DNA-directed RNA polymerase subunit omega (EC:2.7.7.6)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega
Displaying items 91-120 of 128 in total

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