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MPF_scaffold_33

Alias: MPF_Firmicutes_38_45_3

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Displaying items 1-30 of 73 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_33_1
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..516
DNA (516bp) protein (172aa)
metallo-beta-lactamase superfamily hydrolase
Predicted hydrolase of the metallo-beta-lactamase superfamily {ECO:0000313|EMBL:AAM24477.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Ca
Beta-lactamase domain protein
MPF_scaffold_33_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

540..1010
DNA (471bp) protein (157aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM24478.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_33_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1092..2138
DNA (1047bp) protein (349aa)
periplasmic solute-binding protein rbh
Predicted periplasmic solute-binding protein {ECO:0000313|EMBL:AAM24479.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;"
Predicted periplasmic solute-binding protein
MPF_scaffold_33_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2151..2789
DNA (639bp) protein (213aa)
SmtA3; SAM-dependent methyltransferase rbh
SAM-dependent methyltransferases {ECO:0000313|EMBL:AAM24480.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
SAM-dependent methyltransferases
MPF_scaffold_33_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

2793..4016
DNA (1224bp) protein (408aa)
collagenase-like protease rbh
Collagenase-like protease {ECO:0000313|EMBL:KKC29804.1}; Peptidase, U32 family {ECO:0000313|EMBL:EEB75666.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanae
Collagenase and related proteases
MPF_scaffold_33_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4062..5660
DNA (1599bp) protein (533aa)
Cell division protein FtsI {ECO:0000313|EMBL:ERM91660.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanae
FtsI2; cell division protein FtsI/penicillin-binding protein 2 rbh
Cell division protein FtsI/penicillin-binding protein 2
MPF_scaffold_33_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5733..6428
DNA (696bp) protein (232aa)
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldan
RpoD; sporulation sigma factor SigK rbh
RNA polymerase sigma factor
MPF_scaffold_33_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6490..6990
DNA (501bp) protein (167aa)
HAD superfamily hydrolase rbh
HAD superfamily hydrolase {ECO:0000313|EMBL:KKC29807.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaero
Predicted hydrolase of the HAD superfamily
MPF_scaffold_33_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6980..7819
DNA (840bp) protein (280aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
AroE; shikimate 5-dehydrogenase rbh
Shikimate dehydrogenase
MPF_scaffold_33_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7837..9507
DNA (1671bp) protein (557aa)
Type II secretion system protein E {ECO:0000313|EMBL:ERM91664.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="
GspE; pili biogenesis protein PilB-like ATPase rbh
Predicted ATPases involved in pili biogenesis, PilB homologs
MPF_scaffold_33_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9513..10562
DNA (1050bp) protein (350aa)
pili biogenesis protein PilT-like ATPase rbh
Predicted ATPases involved in pili biogenesis, PilT homologs {ECO:0000313|EMBL:AAM24487.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Cal
Predicted ATPases involved in pili biogenesis, PilT homologs
MPF_scaffold_33_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10573..11784
DNA (1212bp) protein (404aa)
Type II secretion system protein F {ECO:0000313|EMBL:ERM91666.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="
HofF; general secretory pathway protein F rbh
General secretory pathway protein F
MPF_scaffold_33_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11815..12141
DNA (327bp) protein (109aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24489.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_33_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12196..12954
DNA (759bp) protein (253aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=273068
PppA; Signal peptidase, cleaves prepilin-like proteins rbh
Type 4 prepilin-like proteins leader peptide-processing enzyme
MPF_scaffold_33_15
DS1215_Thermoanaerobacter_34_5835, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12959..13408
DNA (450bp) protein (150aa)
hypothetical protein
hypothetical protein Tax=DS1215_Thermoanaerobacter_34_5835
Putative uncharacterized protein
MPF_scaffold_33_16
DS1215_Thermoanaerobacter_34_5835, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13420..14085
DNA (666bp) protein (222aa)
hypothetical protein Tax=DS1215_Thermoanaerobacter_34_5835
hypothetical protein
Prokaryotic N-terminal methylation motif domain protein
MPF_scaffold_33_17
DS1215_Thermoanaerobacter_34_5835, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14076..14570
DNA (495bp) protein (165aa)
hypothetical protein
hypothetical protein Tax=DS1215_Thermoanaerobacter_34_5835
Putative uncharacterized protein
MPF_scaffold_33_18
DS1215_Thermoanaerobacter_34_5835, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14599..15090
DNA (492bp) protein (164aa)
hypothetical protein
hypothetical protein Tax=DS1215_Thermoanaerobacter_34_5835
Putative uncharacterized protein
MPF_scaffold_33_19
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15106..15366
DNA (261bp) protein (87aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24495.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Late competence development protein ComFB
MPF_scaffold_33_20
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15377..16318
DNA (942bp) protein (314aa)
FtsA; heat shock protein 70 rbh
Predicted ATPases of the HSP70 class involved in cell division {ECO:0000313|EMBL:AAM24496.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; C
Predicted ATPases of the HSP70 class involved in cell division
MPF_scaffold_33_21
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

16320..16853
DNA (534bp) protein (178aa)
hypothetical protein rbh
Fimbrial protein {ECO:0000313|EMBL:ERM91674.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter s
Putative uncharacterized protein
MPF_scaffold_33_22
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

16854..17579
DNA (726bp) protein (242aa)
PilO; fimbrial assembly protein rbh
Pilus assembly protein PilO {ECO:0000313|EMBL:ERM91675.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldana
Fimbrial assembly protein
MPF_scaffold_33_23
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17594..18109
DNA (516bp) protein (172aa)
Shikimate kinase {ECO:0000255|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000255|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000255|HAMAP-Rule:MF_00109};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia;
AroK; shikimate kinase rbh
Shikimate kinase
MPF_scaffold_33_24
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18116..18982
DNA (867bp) protein (289aa)
Nfo; endonuclease IV rbh
Endonuclease IV {ECO:0000313|EMBL:AAM24500.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter sub
Endonuclease IV
MPF_scaffold_33_25
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18979..20097
DNA (1119bp) protein (373aa)
ProB; gamma-glutamyl kinase (EC:2.7.2.11) rbh
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
Glutamate 5-kinase
MPF_scaffold_33_26
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20087..21331
DNA (1245bp) protein (415aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41) rbh
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412, ECO:0000256|SAAS:SAAS00054156}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412, ECO:000
Gamma-glutamyl phosphate reductase
MPF_scaffold_33_27
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21361..21807
DNA (447bp) protein (149aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00169, ECO:0000256|SAAS:SAAS00027752}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00169};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00169,
AroQ; 3-dehydroquinate dehydratase (EC:4.2.1.10)
3-dehydroquinate dehydratase
MPF_scaffold_33_28
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21812..22879
DNA (1068bp) protein (356aa)
PepP; Xaa-Pro aminopeptidase rbh
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:AAM24504.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobac
Xaa-Pro aminopeptidase
MPF_scaffold_33_29
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22898..23455
DNA (558bp) protein (186aa)
Efp; elongation factor P rbh
Elongation factor P {ECO:0000255|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000255|HAMAP-Rule:MF_00141};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacter
Elongation factor P
MPF_scaffold_33_30
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

23503..23979
DNA (477bp) protein (159aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM24506.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
Displaying items 1-30 of 73 in total

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