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MPF_scaffold_80

Alias: MPF_Firmicutes_38_45_8

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Displaying items 1-30 of 39 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_80_1
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..89
DNA (87bp) protein (29aa)
Alcohol dehydrogenase, iron-containing superfamily {ECO:0000313|EMBL:EEB75830.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EEB75830.1};; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobactera
MPF_scaffold_80_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

97..462
DNA (366bp) protein (122aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKC29332.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_80_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

475..1797
DNA (1323bp) protein (441aa)
recombination factor protein RarA rbh
Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase {ECO:0000313|EMBL:AAM24978.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
Uncharacterized ATPase related to the helicase subunit of the Holliday junction resolvase
MPF_scaffold_80_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1841..1972)
DNA (132bp) protein (44aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC29330.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Uncharacterized protein
MPF_scaffold_80_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2063..3628)
DNA (1566bp) protein (522aa)
PckA; phosphoenolpyruvate carboxykinase (EC:4.1.1.49) rbh
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:00
Phosphoenolpyruvate carboxykinase [ATP]
MPF_scaffold_80_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

3876..4085
DNA (210bp) protein (70aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKC29327.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_80_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4046..4510)
DNA (465bp) protein (155aa)
ADP-ribose pyrophosphatase rbh
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:AAM24975.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaer
ADP-ribose pyrophosphatase
MPF_scaffold_80_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4574..5431
DNA (858bp) protein (286aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacter
RluA2; pseudouridylate synthase rbh
Pseudouridine synthase
MPF_scaffold_80_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5426..6259)
DNA (834bp) protein (278aa)
PflX; Fe-S protein PflX rbh
Putative Fe-S protein PflX {ECO:0000313|EMBL:KKC29324.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaer
Uncharacterized Fe-S protein PflX, homolog of pyruvate formate lyase activating proteins
MPF_scaffold_80_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6606..8249
DNA (1644bp) protein (548aa)
Udk; uridine kinase rbh
Uridine kinase {ECO:0000313|EMBL:AAM24972.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subt
Phosphoribulokinase/uridine kinase
MPF_scaffold_80_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8391..9926
DNA (1536bp) protein (512aa)
Tar8; methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:AAM24971.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="
Methyl-accepting chemotaxis protein
MPF_scaffold_80_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10067..11419
DNA (1353bp) protein (451aa)
Fe-S oxidoreductase rbh
Predicted Fe-S oxidoreductases {ECO:0000313|EMBL:AAM24970.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Calda
Predicted Fe-S oxidoreductases
MPF_scaffold_80_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11479..12141
DNA (663bp) protein (221aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM24969.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_80_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12245..12433
DNA (189bp) protein (63aa)
Fer; ferredoxin 1
Ferredoxin 1 {ECO:0000313|EMBL:AAM24968.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subter
Ferredoxin 1
MPF_scaffold_80_15
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12516..12746
DNA (231bp) protein (77aa)
small, acid-soluble spore proteins, alpha/be
Small, acid-soluble spore proteins, alpha/be {ECO:0000313|EMBL:AAM24967.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;"
Small, acid-soluble spore proteins, alpha/be
MPF_scaffold_80_16
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12851..15211
DNA (2361bp) protein (787aa)
ATP-dependent protease {ECO:0000313|EMBL:KKC29317.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobac
LonB; ATP-dependent protease rbh
Predicted ATP-dependent protease
MPF_scaffold_80_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15208..16329
DNA (1122bp) protein (374aa)
hypothetical protein rbh
Uncharacterized Fe-S protein {ECO:0000313|EMBL:AAM24964.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldana
Uncharacterized Fe-S protein
MPF_scaffold_80_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

16335..16976
DNA (642bp) protein (214aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
Nth; EndoIII-related endonuclease rbh
Predicted EndoIII-related endonuclease
MPF_scaffold_80_19
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17075..18556
DNA (1482bp) protein (494aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM24962.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_80_20
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18586..19008)
DNA (423bp) protein (141aa)
Fur4; Fe2+/Zn2+ uptake regulation proteins
Fe2+/Zn2+ uptake regulation proteins {ECO:0000313|EMBL:AAM24961.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source=
Fe2+/Zn2+ uptake regulation proteins
MPF_scaffold_80_21
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

19180..20001
DNA (822bp) protein (274aa)
Cof2; HAD superfamily hydrolase rbh
Predicted hydrolases of the HAD superfamily {ECO:0000313|EMBL:AAM24960.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;"
Predicted hydrolases of the HAD superfamily
MPF_scaffold_80_22
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20018..20290
DNA (273bp) protein (91aa)
AcyP; acylphosphatase
Acylphosphatase {ECO:0000313|EMBL:KKC29356.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter sub
Acylphosphatase
MPF_scaffold_80_23
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20412..21767
DNA (1356bp) protein (452aa)
RpoN; DNA-directed RNA polymerase specialized sigma subunits, sigma54 homologs rbh
DNA-directed RNA polymerase specialized sigma subunits, sigma54 homologs {ECO:0000313|EMBL:AAM24958.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobact
DNA-directed RNA polymerase specialized sigma subunits, sigma54 homologs
MPF_scaffold_80_24
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

21886..22908
DNA (1023bp) protein (341aa)
DeoR2; transcriptional regulator rbh
Transcriptional regulator, contains sigma factor-related N-terminal domain {ECO:0000313|EMBL:AAM24957.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaeroba
Transcriptional regulator, contains sigma factor-related N-terminal domain
MPF_scaffold_80_25
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22959..23966
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales;
GapA; glyceraldehyde-3-phosphate dehydrogenase rbh
Glyceraldehyde-3-phosphate dehydrogenase, type I
MPF_scaffold_80_26
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

24033..25217
DNA (1185bp) protein (395aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3) rbh
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaeroba
Phosphoglycerate kinase
MPF_scaffold_80_27
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

25265..25978
DNA (714bp) protein (238aa)
tpiA; triosephosphate isomerase (EC:5.3.1.1) rbh
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase
MPF_scaffold_80_28
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

26004..27293
DNA (1290bp) protein (430aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; phosphopyruvate hydratase rbh
Enolase
MPF_scaffold_80_29
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

27421..27660
DNA (240bp) protein (80aa)
Preprotein translocase subunit SecG {ECO:0000313|EMBL:ERM93216.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source=
secG; preprotein translocase subunit SecG
Putative uncharacterized protein
MPF_scaffold_80_30
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

27720..28739
DNA (1020bp) protein (340aa)
Dgt; deoxyguanosinetriphosphate triphosphohydrolase-like protein rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000255|HAMAP-Rule:MF_01212}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
Deoxyguanosinetriphosphate triphosphohydrolase-like protein
Displaying items 1-30 of 39 in total

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