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MPF_scaffold_93

Alias: MPF_Firmicutes_38_45_9

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Displaying items 1-30 of 35 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_93_1
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(101..622)
DNA (522bp) protein (174aa)
Ferritin {ECO:0000256|RuleBase:RU361145}; EC=1.16.3.2 {ECO:0000256|RuleBase:RU361145};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldana
Ftn; ferritin rbh
Ferritin-like protein
MPF_scaffold_93_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(729..1502)
DNA (774bp) protein (258aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobac
16S ribosomal RNA methyltransferase RsmE rbh
Ribosomal RNA small subunit methyltransferase E
MPF_scaffold_93_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1469..2398)
DNA (930bp) protein (310aa)
Ribosomal protein L11 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00735}; Short=L11 Mtase {ECO:0000255|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_00735};; TaxID=273068 species="Bact
prmA; 50S ribosomal protein L11 methyltransferase rbh
Ribosomal protein L11 methyltransferase
MPF_scaffold_93_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2424..3578)
DNA (1155bp) protein (385aa)
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaer
DnaJ; molecular chaperone DnaJ rbh
Chaperone protein DnaJ
MPF_scaffold_93_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3636..5456)
DNA (1821bp) protein (607aa)
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; molecular chaperone DnaK rbh
Chaperone protein DnaK
MPF_scaffold_93_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5475..6089)
DNA (615bp) protein (205aa)
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaeroba
GrpE; heat shock protein GrpE rbh
Protein GrpE
MPF_scaffold_93_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6103..7167)
DNA (1065bp) protein (355aa)
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanae
HrcA; heat shock gene transcriptional regulator rbh
Heat-inducible transcription repressor HrcA
MPF_scaffold_93_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7240..8367)
DNA (1128bp) protein (376aa)
Coproporphyrinogen III oxidase {ECO:0000313|EMBL:ERM93058.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cald
HemN; coproporphyrinogen III oxidase rbh
Putative oxygen-independent coproporphyrinogen III oxidase
MPF_scaffold_93_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8364..10175)
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
LepA; GTP-binding protein LepA rbh
Elongation factor 4
MPF_scaffold_93_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10199..10429)
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC29976.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
hypothetical protein
Putative uncharacterized protein
MPF_scaffold_93_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10436..11551)
DNA (1116bp) protein (372aa)
Glycosyl transferase, group 1 family {ECO:0000313|EMBL:EEB75544.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source=
RfaG8; glycosyltransferase rbh
Predicted glycosyltransferases
MPF_scaffold_93_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11561..13738)
DNA (2178bp) protein (726aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EEB75541.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
hypothetical protein rbh
Putative uncharacterized protein
MPF_scaffold_93_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13749..14909)
DNA (1161bp) protein (387aa)
Stage II sporulation protein P {ECO:0000313|EMBL:KKC29973.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Calda
stage II sporulation protein P rbh
Stage II sporulation protein P
MPF_scaffold_93_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14977..15942)
DNA (966bp) protein (322aa)
germination protease (EC:3.4.24.78) rbh
Germination protease {ECO:0000255|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000255|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000255|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000255|HAMAP-
Germination protease
MPF_scaffold_93_15
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15948..16274)
DNA (327bp) protein (109aa)
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EEB75550.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
Putative uncharacterized protein
MPF_scaffold_93_16
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


16372..16689
DNA (318bp) protein (106aa)
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldan
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20
MPF_scaffold_93_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16714..17730)
DNA (1017bp) protein (339aa)
DNA polymerase III delta subunit {ECO:0000313|EMBL:KKC29969.1}; DNA polymerase III, delta subunit {ECO:0000313|EMBL:EEB75540.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEB75540.1};; TaxID=391606 species="Bacter
HolA; DNA polymerase III subunit delta rbh
DNA polymerase III delta subunit
MPF_scaffold_93_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17727..20006)
DNA (2280bp) protein (760aa)
Metallo-beta-lactamase {ECO:0000313|EMBL:ERM93050.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
ComEC; metallo-beta-lactamase fold hydrolase rbh
Predicted hydrolases of metallo-beta-lactamase fold
MPF_scaffold_93_19
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20008..20730)
DNA (723bp) protein (241aa)
ElaC; beta-lactamase superfamily hydrolase rbh
Metal-dependent hydrolases of the beta-lactamase superfamily III {ECO:0000313|EMBL:AAM24196.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
Metal-dependent hydrolases of the beta-lactamase superfamily III
MPF_scaffold_93_20
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20746..21450)
DNA (705bp) protein (235aa)
Hydrolase {ECO:0000313|EMBL:ERM93093.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterra
haloacid dehalogenase domain-containing protein hydrolase rbh
Haloacid dehalogenase-like hydrolase, putative (Fragment)
MPF_scaffold_93_21
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21546..22040)
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC29963.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
hypothetical protein rbh
Putative uncharacterized protein
MPF_scaffold_93_22
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22161..22346)
DNA (186bp) protein (62aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24192.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_93_23
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22404..22637)
DNA (234bp) protein (78aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24191.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_93_24
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22731..23987)
DNA (1257bp) protein (419aa)
metal-dependent hydrolase rbh
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain {ECO:0000313|EMBL:AAM24190.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Therm
Predicted metal-dependent hydrolases related to alanyl-tRNA synthetase HxxxH domain
MPF_scaffold_93_25
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23980..24855)
DNA (876bp) protein (292aa)
IlvE; branched-chain amino acid aminotransferase (EC:2.6.1.42) rbh
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:AAM24189.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaeroba
Branched-chain amino acid aminotransferase
MPF_scaffold_93_26
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24965..25189)
DNA (225bp) protein (75aa)
ferredoxin 3
Ferredoxin 3 {ECO:0000313|EMBL:AAM24188.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subter
Ferredoxin 3
MPF_scaffold_93_27
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25513..26226)
DNA (714bp) protein (238aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EEB75114.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
hypothetical protein rbh
Putative uncharacterized protein
MPF_scaffold_93_28
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26223..26855)
DNA (633bp) protein (211aa)
SatD {ECO:0000313|EMBL:KKC29956.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterraneus s
SatD protein rbh
SatD
MPF_scaffold_93_29
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26911..28356)
DNA (1446bp) protein (482aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1388761 species="Bacteria; F
gltX; glutamyl-tRNA synthetase rbh
Glutamate--tRNA ligase 1
MPF_scaffold_93_30
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

28477..28959
DNA (483bp) protein (161aa)
PgpA; phosphatidylglycerophosphatase A rbh
Phosphatidylglycerophosphatase A {ECO:0000313|EMBL:KKC30006.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
Phosphatidylglycerophosphatase A
Displaying items 1-30 of 35 in total

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