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MPF_scaffold_95

Alias: MPF_Firmicutes_38_45_10

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Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_95_1
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(87..1175)
DNA (1089bp) protein (363aa)
MviM4; dehydrogenase and related proteins rbh
Predicted dehydrogenases and related proteins {ECO:0000313|EMBL:AAM25130.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;
Predicted dehydrogenases and related proteins
MPF_scaffold_95_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1228..2223)
DNA (996bp) protein (332aa)
PurR8; transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AAM25131.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaero
Transcriptional regulator
MPF_scaffold_95_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2376..2711)
DNA (336bp) protein (112aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM25132.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_95_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2779..3006)
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC29208.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
hypothetical protein
Uncharacterized protein
MPF_scaffold_95_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3110..4096)
DNA (987bp) protein (329aa)
PflA2; pyruvate-formate lyase-activating enzyme rbh
Pyruvate-formate lyase-activating enzyme {ECO:0000313|EMBL:AAM25134.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" sou
Pyruvate-formate lyase-activating enzyme
MPF_scaffold_95_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4097..5485)
DNA (1389bp) protein (463aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EEB76337.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
hypothetical protein rbh
Protein TTE1956
MPF_scaffold_95_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5573..5893)
DNA (321bp) protein (107aa)
nucleotidyltransferase
Predicted nucleotidyltransferases {ECO:0000313|EMBL:AAM25136.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Ca
Predicted nucleotidyltransferases
MPF_scaffold_95_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5866..6258)
DNA (393bp) protein (131aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM25137.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_95_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6392..6985)
DNA (594bp) protein (198aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM25138.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_95_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6997..8484)
DNA (1488bp) protein (496aa)
CaiC; acyl-CoA synthetase rbh
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II {ECO:0000313|EMBL:AAM25139.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaer
Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
MPF_scaffold_95_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8501..9439)
DNA (939bp) protein (313aa)
NagC4; transcriptional regulator rbh
Transcriptional regulator {ECO:0000313|EMBL:AAM25140.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaero
Transcriptional regulator
MPF_scaffold_95_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9436..10173)
DNA (738bp) protein (246aa)
Probable phosphatase CDSM653_01835 {ECO:0000256|HAMAP-Rule:MF_01561}; EC=3.1.3.- {ECO:0000256|HAMAP-Rule:MF_01561};; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; The
His2.2; hydrolase rbh
Probable phosphatase TTE1963
MPF_scaffold_95_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10188..11135)
DNA (948bp) protein (316aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
HprK; HPr kinase/phosphorylase rbh
HPr kinase/phosphorylase
MPF_scaffold_95_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11216..12196
DNA (981bp) protein (327aa)
BirA; biotin-(acetyl-CoA carboxylase) ligase rbh
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
Biotin-(Acetyl-CoA carboxylase) ligase
MPF_scaffold_95_15
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12193..14046)
DNA (1854bp) protein (618aa)
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit C rbh
UvrABC system protein C
MPF_scaffold_95_16
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14052..15476)
DNA (1425bp) protein (475aa)
FtsI5; cell division protein FtsI/penicillin-binding protein 2 rbh
Cell division protein FtsI/penicillin-binding protein 2 {ECO:0000313|EMBL:AAM25146.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanae
Cell division protein FtsI/penicillin-binding protein 2
MPF_scaffold_95_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15451..16695)
DNA (1245bp) protein (415aa)
FtsW3; cell division membrane protein rbh
Bacterial cell division membrane protein {ECO:0000313|EMBL:AAM25147.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" sou
Bacterial cell division membrane protein
MPF_scaffold_95_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16707..17105)
DNA (399bp) protein (133aa)
FHA-domain-containing protein
FHA-domain-containing proteins {ECO:0000313|EMBL:AAM25148.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Calda
FHA-domain-containing proteins
MPF_scaffold_95_19
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17115..19898)
DNA (2784bp) protein (928aa)
UvrA; excinuclease ATPase subunit rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
UvrABC system protein A
MPF_scaffold_95_20
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19905..21893)
DNA (1989bp) protein (663aa)
UvrABC system protein B {ECO:0000255|HAMAP-Rule:MF_00204}; Short=Protein UvrB {ECO:0000255|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000255|HAMAP-Rule:MF_00204}; TaxID=273068 species="Ba
UvrB; excinuclease ABC subunit B rbh
UvrABC system protein B
MPF_scaffold_95_21
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21961..22686)
DNA (726bp) protein (242aa)
2-phosphosulfolactate phosphatase (EC:3.1.3.71) rbh
Probable 2-phosphosulfolactate phosphatase {ECO:0000255|HAMAP-Rule:MF_00490}; EC=3.1.3.71 {ECO:0000255|HAMAP-Rule:MF_00490};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacter
Probable 2-phosphosulfolactate phosphatase
MPF_scaffold_95_22
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22700..23944)
DNA (1245bp) protein (415aa)
DegQ; serine protease rbh
Trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain {ECO:0000313|EMBL:AAM25152.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermo
Trypsin-like serine protease, typically periplasmic, contain C-terminal PDZ domain
MPF_scaffold_95_23
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23954..25150)
DNA (1197bp) protein (399aa)
Prc; periplasmic protease rbh
Periplasmic protease {ECO:0000313|EMBL:AAM25153.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacte
Periplasmic protease
MPF_scaffold_95_24
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25218..26387)
DNA (1170bp) protein (390aa)
NlpD4; metalloendopeptidase-like membrane protein rbh
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:AAM25154.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobac
Membrane proteins related to metalloendopeptidases
MPF_scaffold_95_25
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26380..27273)
DNA (894bp) protein (298aa)
FtsX; cell division protein rbh
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldana
Cell division protein FtsX
MPF_scaffold_95_26
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27257..27943)
DNA (687bp) protein (229aa)
FtsE; cell division ATPase rbh
Cell division ATP-binding protein FtsE {ECO:0000313|EMBL:EEB75197.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" sourc
Cell division ATP-binding protein FtsE
MPF_scaffold_95_27
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27950..29008)
DNA (1059bp) protein (353aa)
SrmR2; regulator of polyketide synthase expression rbh
Regulator of polyketide synthase expression {ECO:0000313|EMBL:AAM25157.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;"
Regulator of polyketide synthase expression
MPF_scaffold_95_28
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29140..30303)
DNA (1164bp) protein (388aa)
MalK; ABC-type sugar/spermidine/putrescine/iron/thiamine transport systems, ATPase component rbh
Sugar ABC transporter ATP-binding protein {ECO:0000313|EMBL:ERM90919.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" s
ABC-type sugar/spermidine/putrescine/iron/thiamine transport systems, ATPase component
MPF_scaffold_95_29
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30422..30514)
DNA (93bp) protein (31aa)
Uncharacterized protein {ECO:0000313|EMBL:ERM90939.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerob
Uncharacterized protein
MPF_scaffold_95_30
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30504..30968)
DNA (465bp) protein (155aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM25159.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
Displaying items 1-30 of 33 in total

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