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MPF_scaffold_126

Alias: MPF_Firmicutes_38_45_13

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_126_1
Thermoanaerobacter pseudethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

103..471
DNA (369bp) protein (123aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY94405.1}; TaxID=340099 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanae
Putative uncharacterized protein
MPF_scaffold_126_2
Thermoanaerobacter pseudethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(598..837)
DNA (240bp) protein (80aa)
redox-active disulfide protein 2
Redox-active disulfide protein 2 {ECO:0000313|EMBL:ABY94406.1}; TaxID=340099 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="T
Redox-active disulfide protein 2
MPF_scaffold_126_3
Thermoanaerobacter pseudethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(940..2109)
DNA (1170bp) protein (390aa)
permease
Permease {ECO:0000313|EMBL:ABY94407.1}; TaxID=340099 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter pseude
Permease
MPF_scaffold_126_4
Thermoanaerobacter pseudethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2149..2484)
DNA (336bp) protein (112aa)
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABY94408.1}; TaxID=340099 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" sou
Transcriptional regulator, ArsR family
MPF_scaffold_126_5
Desulfotomaculum carboxydivorans, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2730..3758
DNA (1029bp) protein (343aa)
integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:AEF94088.1}; TaxID=868595 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum carboxydiv
Integrase catalytic region
MPF_scaffold_126_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4072..4407
DNA (336bp) protein (112aa)
TrxA3; thiol-disulfide isomerase
Thiol-disulfide isomerase and thioredoxins {ECO:0000313|EMBL:AAM24918.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" s
Thiol-disulfide isomerase and thioredoxins
MPF_scaffold_126_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

4470..5438
DNA (969bp) protein (323aa)
OmpR5; response regulator rbh
Diguanylate cyclase {ECO:0000313|EMBL:ERM92243.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacte
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
MPF_scaffold_126_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5487..6227
DNA (741bp) protein (247aa)
Uncharacterized protein {ECO:0000313|EMBL:ERM92242.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerob
hypothetical protein rbh
Putative uncharacterized protein
MPF_scaffold_126_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6283..7146
DNA (864bp) protein (288aa)
Sporulation protein YtxC {ECO:0000313|EMBL:ERM92241.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaero
hypothetical protein rbh
Putative uncharacterized protein
MPF_scaffold_126_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7453..9357
DNA (1905bp) protein (635aa)
thrS; threonyl-tRNA synthetase (EC:6.1.1.3) rbh
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule
Threonine--tRNA ligase
MPF_scaffold_126_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9460..10707
DNA (1248bp) protein (416aa)
ProP7; major facilitator superfamily permease rbh
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:AAM24912.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.
Permeases of the major facilitator superfamily
MPF_scaffold_126_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10704..11756
DNA (1053bp) protein (351aa)
AroC; chorismate synthase (EC:4.2.3.5) rbh
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
Chorismate synthase
MPF_scaffold_126_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11912..12454
DNA (543bp) protein (181aa)
InfC; translation initiation factor IF-3 rbh
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobactera
Translation initiation factor IF-3
MPF_scaffold_126_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


12470..12673
DNA (204bp) protein (68aa)
rpmI; 50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Ca
50S ribosomal protein L35
MPF_scaffold_126_15
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


12692..13051
DNA (360bp) protein (120aa)
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Cal
rplT; 50S ribosomal protein L20
50S ribosomal protein L20
MPF_scaffold_126_16
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13100..13900
DNA (801bp) protein (267aa)
RNA methyltransferase {ECO:0000313|EMBL:ERM92221.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobac
SpoU; rRNA methylase rbh
rRNA methylase
MPF_scaffold_126_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


14152..15171
DNA (1020bp) protein (340aa)
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20) rbh
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit
MPF_scaffold_126_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


15183..17567
DNA (2385bp) protein (795aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20) rbh
Phenylalanine--tRNA ligase beta subunit
MPF_scaffold_126_19
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

17634..18008
DNA (375bp) protein (125aa)
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldan
hypothetical protein
Putative uncharacterized protein
MPF_scaffold_126_20
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

18019..20373
DNA (2355bp) protein (785aa)
collagenase-like protease rbh
Peptidase U32 {ECO:0000313|EMBL:ERM92217.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subt
Collagenase and related proteases
MPF_scaffold_126_21
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

20376..22748
DNA (2373bp) protein (791aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092};; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaero
recombination and DNA strand exchange inhibitor protein rbh
MutS2 protein
MPF_scaffold_126_22
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

22714..23196
DNA (483bp) protein (161aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERM92215.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerob
Putative uncharacterized protein
MPF_scaffold_126_23
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

23238..23933
DNA (696bp) protein (232aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM24884.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Sporulation protein YunB
MPF_scaffold_126_24
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

24256..25422
DNA (1167bp) protein (389aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
BaeS8; sensory transduction histidine kinase rbh
Sensory transduction histidine kinases
MPF_scaffold_126_25
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

25400..26026
DNA (627bp) protein (209aa)
CitB; response regulator rbh
Response regulator receiver domain protein {ECO:0000313|EMBL:EEB75745.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" s
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
MPF_scaffold_126_26
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

26119..27522
DNA (1404bp) protein (468aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaeroba
Lap4; aminopeptidase rbh
M18 family aminopeptidase
MPF_scaffold_126_27
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27540..28181)
DNA (642bp) protein (214aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC29431.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
hypothetical protein rbh
SCP-like extracellular protein, putative
MPF_scaffold_126_28
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

28307..28564
DNA (258bp) protein (86aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24878.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_126_29
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28561..28992)
DNA (432bp) protein (144aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24877.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
Displaying 29 items

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