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MPF_scaffold_273

Alias: MPF_Firmicutes_38_45_30

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Displaying 19 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_273_1
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..94)
DNA (93bp) protein (31aa)
transposase
Transposase {ECO:0000313|EMBL:AIS52460.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter kivui
Putative site-specific integrase-resolvase (Fragment)
MPF_scaffold_273_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(207..773)
DNA (567bp) protein (189aa)
SodA; superoxide dismutase rbh
Superoxide dismutase {ECO:0000313|EMBL:AAM24113.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacte
Superoxide dismutase
MPF_scaffold_273_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1044..1412
DNA (369bp) protein (123aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24114.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Prevent-host-death family protein
MPF_scaffold_273_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1414..1677
DNA (264bp) protein (88aa)
hypothetical protein
Plasmid stabilization protein {ECO:0000313|EMBL:ERM92980.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Calda
Putative uncharacterized protein
MPF_scaffold_273_5
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1798..2352
DNA (555bp) protein (185aa)
UPF0340 protein TheetDRAFT_1474 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source
hypothetical protein rbh
UPF0340 protein TTE0860
MPF_scaffold_273_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2378..4486)
DNA (2109bp) protein (703aa)
Propeptide PepSY amd peptidase M4 {ECO:0000313|EMBL:ERM92982.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="C
hypothetical protein rbh
Peptidase propeptide and YPEB domain protein
MPF_scaffold_273_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4561..5484)
DNA (924bp) protein (308aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM24118.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Glycosyl hydrolase, family 18
MPF_scaffold_273_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5569..5850
DNA (282bp) protein (94aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM24119.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_273_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

5870..6277
DNA (408bp) protein (136aa)
PspC; stress-responsive transcriptional regulator
Phage-shock protein {ECO:0000313|EMBL:ERM92985.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacte
Putative stress-responsive transcriptional regulator
MPF_scaffold_273_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6345..6632)
DNA (288bp) protein (96aa)
regulator of cell autolysis
Histidine kinase {ECO:0000313|EMBL:ERM92991.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter s
Regulator of cell autolysis
MPF_scaffold_273_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6797..7372
DNA (576bp) protein (192aa)
DNA-directed RNA polymerase subunit sigma {ECO:0000313|EMBL:ERM92992.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" s
RpoE2; DNA-directed RNA polymerase specialized sigma subunit rbh
DNA-directed RNA polymerase specialized sigma subunits, sigma24 homologs
MPF_scaffold_273_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

7372..8169
DNA (798bp) protein (266aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC30055.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_273_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

8242..10857
DNA (2616bp) protein (872aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Ca
PolA; DNA polymerase I rbh
DNA polymerase
MPF_scaffold_273_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10867..11472
DNA (606bp) protein (202aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1388761 species="Bacteria; F
coaE; dephospho-CoA kinase rbh
Dephospho-CoA kinase
MPF_scaffold_273_15
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11465..12022
DNA (558bp) protein (186aa)
MltE; lytic murein transglycosylase rbh
Transglycosylase SLT domain protein {ECO:0000313|EMBL:EEB76479.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="
Soluble lytic murein transglycosylase and related regulatory proteins (Some contain LysM/invasin domains)
MPF_scaffold_273_16
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12086..13120
DNA (1035bp) protein (345aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|SAAS:SAAS00075163};; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Ther
PncB; nicotinate phosphoribosyltransferase (EC:2.4.2.11) rbh
Quinolinate phosphoribosyl transferase
MPF_scaffold_273_17
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

13140..14726
DNA (1587bp) protein (529aa)
ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component {ECO:0000313|EMBL:KKC30060.1}; Bacterial extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:EEB76446.1}; Ta
OppA7; ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components rbh
ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components
MPF_scaffold_273_18
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

15148..16068
DNA (921bp) protein (307aa)
Bacterial SH3 domain family protein {ECO:0000313|EMBL:EEB76437.1}; Cell wall-associated hydrolase (Invasion-associated proteins) {ECO:0000313|EMBL:KKC30061.1}; TaxID=391606 species="Bacteria; Firmicut
Spr; cell wall-associated hydrolase (invasion-associated proteins) rbh
Bacterial SH3 domain family protein
MPF_scaffold_273_19
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

16168..17988
DNA (1821bp) protein (607aa)
GTP-binding protein TypA/BipA {ECO:0000313|EMBL:EEB76482.1}; Membrane GTPase involved in stress response {ECO:0000313|EMBL:KKC30062.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoan
TypA; stress response membrane GTPase rbh
GTP-binding protein TypA
Displaying 19 items

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