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MPF_scaffold_341

Alias: MPF_Firmicutes_38_45_38

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_341_1
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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72..1424
DNA (1353bp) protein (451aa)
MurE; UDP-N-acetylmuramyl tripeptide synthase rbh
UDP-N-acetylmuramyl tripeptide synthase {ECO:0000313|EMBL:AAM23325.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" sour
UDP-N-acetylmuramyl tripeptide synthase
MPF_scaffold_341_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

1421..2149
DNA (729bp) protein (243aa)
CobB/CobQ-like glutamine amidotransferase domain protein {ECO:0000313|EMBL:EEB75852.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldana
glutamine amidotransferase rbh
Predicted glutamine amidotransferase
MPF_scaffold_341_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2440..4695)
DNA (2256bp) protein (752aa)
alpha-glucosidase rbh
Alpha-glucosidases, family 31 of glycosyl hydrolases {ECO:0000313|EMBL:AAM23323.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerob
Alpha-glucosidases, family 31 of glycosyl hydrolases
MPF_scaffold_341_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4707..4964)
DNA (258bp) protein (86aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM23322.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_341_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4977..6071)
DNA (1095bp) protein (365aa)
recF; recombination protein F rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaeroba
DNA replication and repair protein RecF
MPF_scaffold_341_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6082..6288)
DNA (207bp) protein (69aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM23320.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_341_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6302..7414)
DNA (1113bp) protein (371aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=391606 species="Bacter
DnaN; DNA polymerase III subunit beta (EC:2.7.7.7) rbh
DNA polymerase III subunit beta
MPF_scaffold_341_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7652..8983)
DNA (1332bp) protein (444aa)
dnaA; chromosome replication initiator DnaA rbh
Chromosomal replication initiator protein DnaA {ECO:0000256|HAMAP-Rule:MF_00377, ECO:0000256|SAAS:SAAS00009621}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermo
Chromosomal replication initiator protein DnaA
MPF_scaffold_341_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

9639..9989
DNA (351bp) protein (117aa)
rnpA; ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
Ribonuclease P protein component
MPF_scaffold_341_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10214..10834
DNA (621bp) protein (207aa)
YidC; preprotein translocase subunit YidC rbh
Preprotein translocase subunit YidC {ECO:0000313|EMBL:KKC28447.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="
Membrane protein insertase YidC
MPF_scaffold_341_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

10836..11456
DNA (621bp) protein (207aa)
DNA-binding protein {ECO:0000313|EMBL:ERM91606.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacte
Jag; RNA-binding protein rbh
Predicted RNA-binding protein
MPF_scaffold_341_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11559..12941
DNA (1383bp) protein (461aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoan
trmE; tRNA modification GTPase TrmE rbh
tRNA modification GTPase MnmE
MPF_scaffold_341_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

12950..14851
DNA (1902bp) protein (634aa)
GidA2; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=391606 species="Bacter
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG 1
MPF_scaffold_341_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

14832..15551
DNA (720bp) protein (240aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
gidB; 16S rRNA methyltransferase GidB rbh
Ribosomal RNA small subunit methyltransferase G
Displaying 14 items

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