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MPF_scaffold_366

Alias: MPF_Firmicutes_38_45_40

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_366_1
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(87..743)
DNA (657bp) protein (219aa)
CcdA; cytochrome c biogenesis protein rbh
Cytochrome c biogenesis protein {ECO:0000313|EMBL:AAM24279.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cald
Cytochrome c biogenesis protein
MPF_scaffold_366_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(827..2164)
DNA (1338bp) protein (446aa)
PaaK; coenzyme F390 synthetase rbh
Coenzyme F390 synthetase {ECO:0000313|EMBL:AAM24278.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerob
Coenzyme F390 synthetase
MPF_scaffold_366_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2257..3021)
DNA (765bp) protein (255aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029492}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241, ECO:0000256|SAAS:SAAS00029496};; GlcN6P deaminase {ECO
nagB; glucosamine-6-phosphate deaminase (EC:3.5.99.6) rbh
Glucosamine-6-phosphate deaminase
MPF_scaffold_366_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

3131..4483
DNA (1353bp) protein (451aa)
GlcNAc-PI de-N-acetylase family protein {ECO:0000313|EMBL:EEB75254.1}; Uncharacterized protein {ECO:0000313|EMBL:KKC29821.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacter
LmbE family protein rbh
GlcNAc-PI de-N-acetylase family protein
MPF_scaffold_366_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4484..5038)
DNA (555bp) protein (185aa)
PaaY; carbonic anhydrase rbh
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily {ECO:0000313|EMBL:AAM24276.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterac
Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily
MPF_scaffold_366_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5259..5981)
DNA (723bp) protein (241aa)
Creatininase subfamily protein {ECO:0000313|EMBL:EEB75253.1}; EC=3.5.2.10 {ECO:0000313|EMBL:EEB75253.1};; Uncharacterized protein, putative amidase {ECO:0000313|EMBL:KKC29819.1}; TaxID=391606 species=
amidase rbh
Creatininase subfamily protein
MPF_scaffold_366_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

6065..6655
DNA (591bp) protein (197aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM24274.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_366_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6702..7508)
DNA (807bp) protein (269aa)
LytE; LysM repeat-containing protein rbh
LysM-repeat proteins and domains {ECO:0000313|EMBL:AAM24273.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
LysM-repeat proteins and domains
MPF_scaffold_366_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7690..8925)
DNA (1236bp) protein (412aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
BaeS5; sensory transduction histidine kinase rbh
Sensory transduction histidine kinases
MPF_scaffold_366_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9059..9748)
DNA (690bp) protein (230aa)
OmpR3; response regulator rbh
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain {ECO:0000313|EMBL:AAM24271.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales
Response regulators consisting of a CheY-like receiver domain and a HTH DNA-binding domain
MPF_scaffold_366_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9767..11038)
DNA (1272bp) protein (424aa)
AroA2; 3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19) rbh
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_0
3-phosphoshikimate 1-carboxyvinyltransferase
MPF_scaffold_366_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11048..11893)
DNA (846bp) protein (282aa)
TyrA; prephenate dehydrogenase rbh
Prephenate dehydrogenase {ECO:0000313|EMBL:AAM24269.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerob
Prephenate dehydrogenase
MPF_scaffold_366_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11890..12906)
DNA (1017bp) protein (339aa)
AroA; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54) rbh
3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase {ECO:0000313|EMBL:AAM24268.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Cald
3-Deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
MPF_scaffold_366_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12923..13756)
DNA (834bp) protein (278aa)
Prephenate dehydratase {ECO:0000256|RuleBase:RU361254}; Short=PDT {ECO:0000256|RuleBase:RU361254};; EC=4.2.1.51 {ECO:0000256|RuleBase:RU361254};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia
PheA; prephenate dehydratase rbh
Prephenate dehydratase
MPF_scaffold_366_15
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13886..15016)
DNA (1131bp) protein (377aa)
3-dehydroquinate synthase {ECO:0000255|HAMAP-Rule:MF_00110}; EC=4.2.3.4 {ECO:0000255|HAMAP-Rule:MF_00110};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaero
aroB; 3-dehydroquinate synthase rbh
3-dehydroquinate synthase
Displaying 15 items

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