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MPF_scaffold_443

Alias: MPF_Firmicutes_38_45_49

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_443_1
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(3..785)
DNA (783bp) protein (261aa)
Transcriptional regulator {ECO:0000313|EMBL:ERM92636.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaer
PspF; transcriptional regulator
NtrC family Transcriptional regulator, ATPase domain protein
MPF_scaffold_443_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(993..1811)
DNA (819bp) protein (273aa)
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerob
hypothetical protein rbh
Putative uncharacterized protein
MPF_scaffold_443_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1821..1976)
DNA (156bp) protein (52aa)
Uncharacterized protein {ECO:0000313|EMBL:KKC30728.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
hypothetical protein
Putative uncharacterized protein
MPF_scaffold_443_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2371..3489)
DNA (1119bp) protein (373aa)
Fe-S center protein rbh
Uncharacterized Fe-S center protein {ECO:0000313|EMBL:AAM23478.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="
4Fe-4S ferredoxin, iron-sulfur binding domain protein
MPF_scaffold_443_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3489..5063)
DNA (1575bp) protein (525aa)
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Ca
MviN; hypothetical protein rbh
Integral membrane protein MviN
MPF_scaffold_443_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5074..5499)
DNA (426bp) protein (142aa)
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ {ECO:0000255|HAMAP-Rule:MF_00406}; EC=4.2.1.59 {ECO:0000255|HAMAP-Rule:MF_00406};; (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase {ECO:0
fabZ; (3R)-hydroxymyristoyl-ACP dehydratase
3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
MPF_scaffold_443_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5591..5926)
DNA (336bp) protein (112aa)
FlgJ; flagellum-specific muramidase
Flagellum-specific muramidase {ECO:0000313|EMBL:AAM23475.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldan
Flagellum-specific muramidase
MPF_scaffold_443_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5937..6737)
DNA (801bp) protein (267aa)
Conserved domain protein {ECO:0000313|EMBL:EEB76627.1}; Flagellar basal body and hook protein {ECO:0000313|EMBL:KKC30723.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobactera
FlgE2; flagellar basal body and hook proteins rbh
Flagellar basal-body rod protein FlgG
MPF_scaffold_443_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6753..7508)
DNA (756bp) protein (252aa)
FlgE; flagellar basal body and hook proteins rbh
Flagellar basal body and hook proteins {ECO:0000313|EMBL:AAM23473.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" sourc
Flagellar basal body and hook proteins
MPF_scaffold_443_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7521..8549)
DNA (1029bp) protein (343aa)
MreB; rod shape-determining protein Mbl rbh
HSP70 class molecular chaperones involved in cell morphogenesis {ECO:0000313|EMBL:AAM23472.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae;
Cell shape determining protein, MreB/Mrl family
MPF_scaffold_443_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8677..8940)
DNA (264bp) protein (88aa)
transcriptional regulator of sigma-E/sigma-K-dependent gene spoIIID
Transcription regulator {ECO:0000313|EMBL:KKC30720.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Transcription regulator of sigma-E/sigma-K-dependent gene spoIIID
MPF_scaffold_443_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9061..9873)
DNA (813bp) protein (271aa)
NlpD; metalloendopeptidase-like membrane protein rbh
Membrane proteins related to metalloendopeptidases {ECO:0000313|EMBL:AAM23470.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobac
Membrane proteins related to metalloendopeptidases
MPF_scaffold_443_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9942..11036)
DNA (1095bp) protein (365aa)
SpoIID; sporulation protein and-like proteins rbh
Sporulation protein and related proteins {ECO:0000313|EMBL:AAM23469.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" sou
Sporulation protein and related proteins
MPF_scaffold_443_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11084..12565)
DNA (1482bp) protein (494aa)
S-layer domain protein {ECO:0000313|EMBL:EEB76622.1}; S-layer-like domain-containing protein {ECO:0000313|EMBL:KKC30717.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacteral
S-layer protein rbh
S-layer homology domain protein
MPF_scaffold_443_15
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12584..13144)
DNA (561bp) protein (187aa)
S-layer protein rbh
S-layer homology domain protein {ECO:0000313|EMBL:AAM23467.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cald
S-layer homology domain protein
Displaying 15 items

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