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MPF_scaffold_445

Alias: MPF_Firmicutes_38_45_51

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_445_1
Thermoanaerobacter thermohydrosulfuricus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(2..217)
DNA (216bp) protein (72aa)
acyl-CoA hydrolase
Acyl-CoA hydrolase {ECO:0000313|EMBL:EMT40069.1}; TaxID=1198630 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaeroba
Acyl-CoA hydrolase
MPF_scaffold_445_2
Carboxydothermus hydrogenoformans, Carboxydothermus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(446..1477)
DNA (1032bp) protein (344aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ABB13780.1}; TaxID=246194 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Carboxydothermus.;" source="Carboxydot
Putative membrane protein
MPF_scaffold_445_3
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1455..2525)
DNA (1071bp) protein (357aa)
Alanine racemase domain protein
Alanine racemase domain protein {ECO:0000313|EMBL:CBH20175.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sti
Alanine racemase domain protein
MPF_scaffold_445_4
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2877..4304)
DNA (1428bp) protein (476aa)
Na+/H+ antiporter NhaC
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:ABW17837.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain OhI
Na+/H+ antiporter NhaC
MPF_scaffold_445_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(4659..6128)
DNA (1470bp) protein (490aa)
PspF3; transcriptional regulator rbh
NtrC family Transcriptional regulator, ATPase domain protein {ECO:0000313|EMBL:AAM23979.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Cal
NtrC family Transcriptional regulator, ATPase domain protein
MPF_scaffold_445_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(6541..8166)
DNA (1626bp) protein (542aa)
RNA processing exonuclease {ECO:0000313|EMBL:KKC30280.1}; RNA-metabolising metallo-beta-lactamase family protein {ECO:0000313|EMBL:EEB75867.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia;
Ysh1; RNA processing exonuclease rbh
Predicted exonuclease of the beta-lactamase fold involved in RNA processing
MPF_scaffold_445_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8185..8625)
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:ERM91315.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerob
hypothetical protein
Uncharacterized protein
MPF_scaffold_445_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8591..9058)
DNA (468bp) protein (156aa)
Nucleotidyltransferase {ECO:0000313|EMBL:ERM91293.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
nucleotidyltransferase
Predicted nucleotidyltransferases
MPF_scaffold_445_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9106..9606)
DNA (501bp) protein (167aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AAM23973.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_445_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9606..9983)
DNA (378bp) protein (126aa)
DNA polymerase subunit beta {ECO:0000313|EMBL:ERM91291.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldana
hypothetical protein
DNA polymerase, beta domain protein region
MPF_scaffold_445_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(10009..11451)
DNA (1443bp) protein (481aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacte
RtcB; hypothetical protein rbh
Uncharacterized protein
MPF_scaffold_445_12
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11834..12226)
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:ERM91313.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerob
transposase
Transposase, putative
MPF_scaffold_445_13
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12250..12399)
DNA (150bp) protein (50aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM23968.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Putative uncharacterized protein
MPF_scaffold_445_14
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12380..12973)
DNA (594bp) protein (198aa)
Integrase {ECO:0000313|EMBL:ERM91289.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobacter subterra
site-specific integrase-resolvase rbh
Predicted site-specific integrase-resolvase
MPF_scaffold_445_15
unknown

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comp(12980..13051)
DNA (72bp) protein (24aa)
Displaying 15 items

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