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MPF_scaffold_505

Alias: MPF_Firmicutes_38_45_59

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
MPF_scaffold_505_1
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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432..1169
DNA (738bp) protein (246aa)
FabG; dehydrogenase rbh
3-ketoacyl-ACP reductase {ECO:0000313|EMBL:ERM91176.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaero
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases)
MPF_scaffold_505_2
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1162..1884)
DNA (723bp) protein (241aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacte
RsuA; 16S rRNA uridine-516 pseudouridylate synthase rbh
Pseudouridine synthase
MPF_scaffold_505_3
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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2094..3152
DNA (1059bp) protein (353aa)
PurR; transcriptional regulator rbh
Periplasmic binding proteins and sugar binding domain of the LacI family, putative {ECO:0000313|EMBL:EEB75806.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermo
Transcriptional regulator
MPF_scaffold_505_4
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3189..5039
DNA (1851bp) protein (617aa)
ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component {ECO:0000313|EMBL:KKC30901.1}; Bacterial extracellular solute-binding protein, family 5 {ECO:0000313|EMBL:EEB75805.1}; Ta
OppA; ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components rbh
ABC-type dipeptide/oligopeptide/nickel transport systems, periplasmic components
MPF_scaffold_505_5
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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5063..6049
DNA (987bp) protein (329aa)
DppB; dipeptide/oligopeptide/nickel ABC transporter permease rbh
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components {ECO:0000313|EMBL:AAM23363.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaer
ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
MPF_scaffold_505_6
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6046..6927
DNA (882bp) protein (294aa)
DppC; dipeptide/oligopeptide/nickel ABC transporter permease rbh
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:KKC30903.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerob
Binding-protein-dependent transport systems inner membrane component
MPF_scaffold_505_7
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6928..7908
DNA (981bp) protein (327aa)
DppD; dipeptide/oligopeptide/nickel ABC transporter ATPase rbh
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component {ECO:0000313|EMBL:AAM23365.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobac
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
MPF_scaffold_505_8
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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7905..8885
DNA (981bp) protein (327aa)
Peptide ABC transporter ATPase {ECO:0000313|EMBL:ERM91183.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cald
OppF; dipeptide/oligopeptide/nickel ABC transporter ATPase rbh
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
MPF_scaffold_505_9
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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9085..10968
DNA (1884bp) protein (628aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC30895.1}; TaxID=391606 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
Cellulase (Glycosyl hydrolase family 5), putative
MPF_scaffold_505_10
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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10972..11880
DNA (909bp) protein (303aa)
glycosylase rbh
Predicted glycosylase {ECO:0000313|EMBL:AAM23369.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaerobact
Predicted glycosylase
Displaying 10 items

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